RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 FSTL1Q12841 308 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 GAB4Q2WGN9 574 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 RGL3Q3MIN7 710 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 BSPRYQ5W0U4 402 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 SCARA3Q6AZY7 606 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 ANKS4BQ8N8V4 417 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 Q8TCH9 128 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 DHX38Q92620 1227 aaKnown RBP1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 EXTL1Q92935 676 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 CRTAC1Q9NQ79 661 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 TPX2Q9ULW0 747 aaKnown RBP1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 PLA2G2DQ9UNK4 145 aa1.21□□□□□ -2.22
RNU6-539P-201ENST00000516665 PLSCR1O15162 318 aa1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 KCNAB3O43448 404 aa1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 SLITRK5O94991 958 aa1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 C1SP09871 688 aa1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 TPP2P29144 1249 aaPredicted RBP1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 RAB3GAP1Q15042 981 aa1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 ETFBKMTQ8IXQ9 262 aa1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 MYO19Q96H55 970 aa1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 ZC3H12CQ9C0D7 883 aaKnown RBP1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 BHLHE41Q9C0J9 482 aaPredicted RBP1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.2□□□□□ -2.22
RNU6-539P-201ENST00000516665 NUDT19A8MXV4 375 aa1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 FOXN1O15353 648 aa1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 USP2O75604 605 aaPredicted RBP1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 SLFN14P0C7P3 912 aa1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 ATF2P15336 505 aa1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 PRKD1Q15139 912 aaPredicted RBP1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 RIOX1Q9H6W3 641 aa1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 NTMQ9P121 344 aa1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 DUSP13Q9UII6 198 aa1.19□□□□□ -2.22
RNU6-539P-201ENST00000516665 ANKRD33BA6NCL7 494 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 MPOP05164 745 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 PNLIPP16233 465 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 CES1P23141 567 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 CCKBRP32239 447 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 KIF4BQ2VIQ3 1234 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 PRR16Q569H4 304 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 FAM26DQ5JW98 314 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 RUSC1-AS1Q66K80 236 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 BORAQ6PGQ7 559 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 ADGRG3Q86Y34 549 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 RNF214Q8ND24 703 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 LINC01599Q8WXQ3 324 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 SMG7Q92540 1137 aaKnown RBP1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 DDX11Q96FC9 970 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 WBP1Q96G27 269 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 PRRX2Q99811 253 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 PTPN18Q99952 460 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 SPATA6Q9NWH7 488 aaPredicted RBP1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 TESQ9UGI8 421 aaKnown RBP1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 PCDHA11Q9Y5I1 949 aa1.18□□□□□ -2.22
RNU6-539P-201ENST00000516665 A0A1W2PP55 124 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 TRIM38O00635 465 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 B4GALT3O60512 393 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 ZMYND10O75800 440 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 ACRP10323 421 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 PROZP22891 400 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 NTF4P34130 210 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 MC3RP41968 323 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 KIAA2012Q0VF49 1180 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 DUSP4Q13115 394 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 KIR3DS1Q14943 382 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 LCE1FQ5T754 118 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 ARMCX6Q7L4S7 300 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 ZNF483Q8TF39 744 aaPredicted RBP1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 CACTINQ8WUQ7 758 aaKnown RBP1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 PLCD4Q9BRC7 762 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 G6PC3Q9BUM1 346 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 CLEC4MQ9H2X3 399 aaPredicted RBP1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 ELP3Q9H9T3 547 aa1.17□□□□□ -2.22
RNU6-539P-201ENST00000516665 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 MYADML2A6NDP7 307 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 MROH6A6NGR9 719 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 TULP1O00294 542 aaPredicted RBP1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 NRDCO43847 1150 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 LMNAP02545 664 aaKnown RBP1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 MAKP20794 623 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 WASP42768 502 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 PDE4DQ08499 809 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 RPTNQ6XPR3 784 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 PIK3R5Q8WYR1 880 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 CLIP3Q96DZ5 547 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 ADOQ96SZ5 270 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 DUSP15Q9H1R2 295 aaPredicted RBP1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 ZNHIT2Q9UHR6 403 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 LRP12Q9Y561 859 aa1.16□□□□□ -2.22
RNU6-539P-201ENST00000516665 PRR23D1E9PI22 279 aaPredicted RBP1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 DKK1O94907 266 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 PRR23D2P0DMB1 279 aaPredicted RBP1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 TNFRSF1BP20333 461 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 TUBA3CQ13748 450 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 TUBA3EQ6PEY2 450 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 ULK2Q8IYT8 1036 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 MTMR14Q8NCE2 650 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 RIN3Q8TB24 985 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 PLEKHG4BQ96PX9 1271 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 MIPEPQ99797 713 aa1.15□□□□□ -2.23
RNU6-539P-201ENST00000516665 GPBP1L1Q9HC44 474 aaPredicted RBP1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms