RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 BTBD7Q9P203 1132 aa23.42■■□□□ 1.34
DDR1-280ENST00000515881 ROBO3Q96MS0 1386 aa23.41■■□□□ 1.34
DDR1-280ENST00000515881 BAZ2AQ9UIF9 1905 aaKnown RBP23.41■■□□□ 1.34
DDR1-280ENST00000515881 COG2Q14746 738 aa23.41■■□□□ 1.34
DDR1-280ENST00000515881 MORN1Q5T089 497 aa23.41■■□□□ 1.34
DDR1-280ENST00000515881 UBE2Q1Q7Z7E8 422 aa23.41■■□□□ 1.34
DDR1-280ENST00000515881 USP6NLQ92738 828 aa23.41■■□□□ 1.34
DDR1-280ENST00000515881 DEFB118Q96PH6 123 aa23.41■■□□□ 1.34
DDR1-280ENST00000515881 VCPKMTQ9H867 229 aa23.41■■□□□ 1.34
DDR1-280ENST00000515881 KANSL2Q9H9L4 492 aa23.41■■□□□ 1.34
DDR1-280ENST00000515881 CWC22Q9HCG8 908 aaKnown RBP23.41■■□□□ 1.34
DDR1-280ENST00000515881 MINDY4BA8MYZ0 360 aa23.4■■□□□ 1.34
DDR1-280ENST00000515881 TDO2P48775 406 aa23.4■■□□□ 1.34
DDR1-280ENST00000515881 TRIM32Q13049 653 aa23.4■■□□□ 1.34
DDR1-280ENST00000515881 SPICE1Q8N0Z3 855 aa23.4■■□□□ 1.34
DDR1-280ENST00000515881 SEC62Q99442 399 aaKnown RBP23.4■■□□□ 1.34
DDR1-280ENST00000515881 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.4■■□□□ 1.349e-6■■■■■ 32.4
DDR1-280ENST00000515881 HOXC10Q9NYD6 342 aa23.4■■□□□ 1.34
DDR1-280ENST00000515881 APPP05067 770 aa23.39■■□□□ 1.33
DDR1-280ENST00000515881 EEF2P13639 858 aaKnown RBP23.39■■□□□ 1.33
DDR1-280ENST00000515881 CAPN2P17655 700 aa23.39■■□□□ 1.33
DDR1-280ENST00000515881 RASA1P20936 1047 aa23.39■■□□□ 1.33
DDR1-280ENST00000515881 RGS2P41220 211 aa23.39■■□□□ 1.33
DDR1-280ENST00000515881 ZMYM1Q5SVZ6 1142 aa23.39■■□□□ 1.33
DDR1-280ENST00000515881 TRMT44Q8IYL2 757 aaKnown RBP23.39■■□□□ 1.33
DDR1-280ENST00000515881 STAP2Q9UGK3 403 aa23.39■■□□□ 1.33
DDR1-280ENST00000515881 RPTORQ8N122 1335 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 PATL2C9JE40 543 aaKnown RBP23.38■■□□□ 1.33
DDR1-280ENST00000515881 FARP2O94887 1054 aaPredicted RBP23.38■■□□□ 1.33
DDR1-280ENST00000515881 TFRCP02786 760 aaKnown RBP23.38■■□□□ 1.33
DDR1-280ENST00000515881 ATP2B2Q01814 1243 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 WDR78Q5VTH9 848 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 IFNL3Q8IZI9 196 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 STK11IPQ8N1F8 1099 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 APBA2Q99767 749 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.38■■□□□ 1.33
DDR1-280ENST00000515881 CRISPLD2Q9H0B8 497 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 MKNK2Q9HBH9 465 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 HMX1Q9NP08 348 aaPredicted RBP23.38■■□□□ 1.33
DDR1-280ENST00000515881 PLXNB2O15031 1838 aa23.38■■□□□ 1.33
DDR1-280ENST00000515881 WDR46O15213 610 aaKnown RBP23.37■■□□□ 1.33
DDR1-280ENST00000515881 ZKSCAN1P17029 563 aaPredicted RBP23.37■■□□□ 1.33
DDR1-280ENST00000515881 PDE1AP54750 535 aa23.37■■□□□ 1.33
DDR1-280ENST00000515881 MAP2K5Q13163 448 aa23.37■■□□□ 1.33
DDR1-280ENST00000515881 MAP3K21Q5TCX8 1036 aa23.37■■□□□ 1.33
DDR1-280ENST00000515881 NACAP1Q9BZK3 213 aa23.37■■□□□ 1.33
DDR1-280ENST00000515881 SLC15A5A6NIM6 579 aa23.36■■□□□ 1.33
DDR1-280ENST00000515881 FLOT1O75955 427 aa23.36■■□□□ 1.33
DDR1-280ENST00000515881 PTPREP23469 700 aa23.36■■□□□ 1.33
DDR1-280ENST00000515881 DSG3P32926 999 aa23.36■■□□□ 1.33
DDR1-280ENST00000515881 MB21D1Q8N884 522 aa23.36■■□□□ 1.33
DDR1-280ENST00000515881 MKI67P46013 3256 aaKnown RBP23.36■■□□□ 1.33
DDR1-280ENST00000515881 DOCK3Q8IZD9 2030 aa23.35■■□□□ 1.33
DDR1-280ENST00000515881 PRKAR2AP13861 404 aaKnown RBP23.35■■□□□ 1.33
DDR1-280ENST00000515881 CCL14Q16627 93 aa23.35■■□□□ 1.33
DDR1-280ENST00000515881 EVI5LQ96CN4 794 aa23.35■■□□□ 1.33
DDR1-280ENST00000515881 MOV10L1Q9BXT6 1211 aaKnown RBP23.35■■□□□ 1.33
DDR1-280ENST00000515881 RWDD1Q9H446 243 aaPredicted RBP23.35■■□□□ 1.33
DDR1-280ENST00000515881 ZNF287Q9HBT7 754 aa23.35■■□□□ 1.33
DDR1-280ENST00000515881 GOPCQ9HD26 462 aa23.35■■□□□ 1.33
DDR1-280ENST00000515881 IVNS1ABPQ9Y6Y0 642 aa23.35■■□□□ 1.33
DDR1-280ENST00000515881 SMC5Q8IY18 1101 aa23.34■■□□□ 1.33
DDR1-280ENST00000515881 ATG4CQ96DT6 458 aa23.34■■□□□ 1.33
DDR1-280ENST00000515881 HTATIP2Q9BUP3 242 aa23.34■■□□□ 1.33
DDR1-280ENST00000515881 SPATC1LQ9H0A9 340 aa23.34■■□□□ 1.33
DDR1-280ENST00000515881 GRB14Q14449 540 aa23.33■■□□□ 1.33
DDR1-280ENST00000515881 SHCBP1Q8NEM2 672 aa23.33■■□□□ 1.33
DDR1-280ENST00000515881 EXOC6Q8TAG9 804 aa23.33■■□□□ 1.33
DDR1-280ENST00000515881 LNPKQ9C0E8 428 aa23.33■■□□□ 1.33
DDR1-280ENST00000515881 NAPBQ9H115 298 aa23.33■■□□□ 1.33
DDR1-280ENST00000515881 MYH8P13535 1937 aa23.33■■□□□ 1.32
DDR1-280ENST00000515881 PRDM1O75626 825 aa23.32■■□□□ 1.32
DDR1-280ENST00000515881 CACNB2Q08289 660 aaPredicted RBP23.32■■□□□ 1.32
DDR1-280ENST00000515881 ZNF444Q8N0Y2 327 aaPredicted RBP23.32■■□□□ 1.32
DDR1-280ENST00000515881 DPF3Q92784 378 aa23.32■■□□□ 1.32
DDR1-280ENST00000515881 NYAP2Q9P242 653 aa23.32■■□□□ 1.32
DDR1-280ENST00000515881 A0A0G2JMZ2 1700 aa23.32■■□□□ 1.32
DDR1-280ENST00000515881 IGKV6D-41A0A0C4DH26 115 aa23.31■■□□□ 1.32
DDR1-280ENST00000515881 RAD21O60216 631 aa23.31■■□□□ 1.32
DDR1-280ENST00000515881 SLC34A2O95436 690 aa23.31■■□□□ 1.32
DDR1-280ENST00000515881 HOXC6P09630 235 aa23.31■■□□□ 1.32
DDR1-280ENST00000515881 SAMD1Q6SPF0 538 aaPredicted RBP23.31■■□□□ 1.32
DDR1-280ENST00000515881 CCDC129Q6ZRS4 1044 aa23.31■■□□□ 1.32
DDR1-280ENST00000515881 ANKLE1Q8NAG6 615 aa23.31■■□□□ 1.32
DDR1-280ENST00000515881 FBXO28Q9NVF7 368 aa23.31■■□□□ 1.32
DDR1-280ENST00000515881 H0YGN5 161 aa23.3■■□□□ 1.32
DDR1-280ENST00000515881 FOXP2O15409 715 aa23.3■■□□□ 1.32
DDR1-280ENST00000515881 ERCC3P19447 782 aa23.3■■□□□ 1.32
DDR1-280ENST00000515881 PPARAQ07869 468 aa23.3■■□□□ 1.32
DDR1-280ENST00000515881 PLS1Q14651 629 aa23.3■■□□□ 1.32
DDR1-280ENST00000515881 FAM83BQ5T0W9 1011 aa23.3■■□□□ 1.32
DDR1-280ENST00000515881 FLRT1Q9NZU1 646 aa23.3■■□□□ 1.32
DDR1-280ENST00000515881 ADAMTS5Q9UNA0 930 aa23.3■■□□□ 1.32
DDR1-280ENST00000515881 GREB1LQ9C091 1923 aaPredicted RBP23.29■■□□□ 1.32
DDR1-280ENST00000515881 STRNO43815 780 aa23.29■■□□□ 1.32
DDR1-280ENST00000515881 IGHDP01880 384 aa23.29■■□□□ 1.32
DDR1-280ENST00000515881 SLC3A2P08195 630 aaKnown RBP23.29■■□□□ 1.32
DDR1-280ENST00000515881 PDE4BQ07343 736 aa23.29■■□□□ 1.32
DDR1-280ENST00000515881 B4GALNT3Q6L9W6 998 aa23.29■■□□□ 1.32
DDR1-280ENST00000515881 PAWRQ96IZ0 340 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms