RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 COG2Q14746 738 aa20.97■□□□□ 0.95
DDX41-217ENST00000515562 MORN1Q5T089 497 aa20.97■□□□□ 0.95
DDX41-217ENST00000515562 DPF3Q92784 378 aa20.97■□□□□ 0.95
DDX41-217ENST00000515562 PRKAR2AP13861 404 aaKnown RBP20.96■□□□□ 0.95
DDX41-217ENST00000515562 GNAT2P19087 354 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 TRIM32Q13049 653 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 SBK1Q52WX2 424 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 MAP3K21Q5TCX8 1036 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 ANKLE1Q8NAG6 615 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 OSBP2Q969R2 916 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 HOXC10Q9NYD6 342 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 BTBD7Q9P203 1132 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 TMX2Q9Y320 296 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 IVNS1ABPQ9Y6Y0 642 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 ROBO3Q96MS0 1386 aa20.96■□□□□ 0.95
DDX41-217ENST00000515562 H0YGN5 161 aa20.95■□□□□ 0.94
DDX41-217ENST00000515562 MAP2K5Q13163 448 aa20.95■□□□□ 0.94
DDX41-217ENST00000515562 WDR78Q5VTH9 848 aa20.95■□□□□ 0.94
DDX41-217ENST00000515562 CLEC10AQ8IUN9 316 aa20.95■□□□□ 0.94
DDX41-217ENST00000515562 MB21D1Q8N884 522 aa20.95■□□□□ 0.94
DDX41-217ENST00000515562 VCPKMTQ9H867 229 aa20.95■□□□□ 0.94
DDX41-217ENST00000515562 KANSL2Q9H9L4 492 aa20.95■□□□□ 0.94
DDX41-217ENST00000515562 ZBTB47Q9UFB7 747 aaPredicted RBP20.95■□□□□ 0.94
DDX41-217ENST00000515562 SLC15A5A6NIM6 579 aa20.94■□□□□ 0.94
DDX41-217ENST00000515562 GSG1L2A8MUP6 293 aa20.94■□□□□ 0.94
DDX41-217ENST00000515562 SMIM22K7EJ46 135 aa20.94■□□□□ 0.94
DDX41-217ENST00000515562 WDR46O15213 610 aaKnown RBP20.94■□□□□ 0.94
DDX41-217ENST00000515562 GPAA1O43292 621 aa20.94■□□□□ 0.94
DDX41-217ENST00000515562 MX1P20591 662 aa20.94■□□□□ 0.94
DDX41-217ENST00000515562 HABP4Q5JVS0 413 aaKnown RBP20.94■□□□□ 0.94
DDX41-217ENST00000515562 PI4K2BQ8TCG2 481 aa20.94■□□□□ 0.94
DDX41-217ENST00000515562 ZNF236Q9UL36 1845 aa20.94■□□□□ 0.94
DDX41-217ENST00000515562 RLFQ13129 1914 aa20.94■□□□□ 0.94
DDX41-217ENST00000515562 GREB1LQ9C091 1923 aaPredicted RBP20.94■□□□□ 0.94
DDX41-217ENST00000515562 GRB14Q14449 540 aa20.93■□□□□ 0.94
DDX41-217ENST00000515562 SIAH1Q8IUQ4 282 aa20.93■□□□□ 0.94
DDX41-217ENST00000515562 SPICE1Q8N0Z3 855 aa20.93■□□□□ 0.94
DDX41-217ENST00000515562 CRBNQ96SW2 442 aa20.93■□□□□ 0.94
DDX41-217ENST00000515562 NR2E3Q9Y5X4 410 aa20.93■□□□□ 0.94
DDX41-217ENST00000515562 PARP14Q460N5 1801 aa20.92■□□□□ 0.94
DDX41-217ENST00000515562 FLOT1O75955 427 aa20.92■□□□□ 0.94
DDX41-217ENST00000515562 EEF2P13639 858 aaKnown RBP20.92■□□□□ 0.94
DDX41-217ENST00000515562 PTPREP23469 700 aa20.92■□□□□ 0.94
DDX41-217ENST00000515562 TDO2P48775 406 aa20.92■□□□□ 0.94
DDX41-217ENST00000515562 KIAA1755Q5JYT7 1200 aa20.92■□□□□ 0.94
DDX41-217ENST00000515562 NECAB2Q7Z6G3 386 aa20.92■□□□□ 0.94
DDX41-217ENST00000515562 FSD1Q9BTV5 496 aa20.92■□□□□ 0.94
DDX41-217ENST00000515562 GOPCQ9HD26 462 aa20.92■□□□□ 0.94
DDX41-217ENST00000515562 M0R2C6 588 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 HOXC6P09630 235 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 DSG3P32926 999 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 ATP2B2Q01814 1243 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 CACNB2Q08289 660 aaPredicted RBP20.91■□□□□ 0.94
DDX41-217ENST00000515562 CCL14Q16627 93 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 SHCBP1Q8NEM2 672 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 OTUD7AQ8TE49 926 aaPredicted RBP20.91■□□□□ 0.94
DDX41-217ENST00000515562 PAWRQ96IZ0 340 aaKnown RBP20.91■□□□□ 0.94
DDX41-217ENST00000515562 SPATC1LQ9H0A9 340 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 MKNK2Q9HBH9 465 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 ZNF287Q9HBT7 754 aa20.91■□□□□ 0.94
DDX41-217ENST00000515562 EPB41L4AQ9HCS5 686 aaPredicted RBP20.91■□□□□ 0.94
DDX41-217ENST00000515562 MINDY4BA8MYZ0 360 aa20.9■□□□□ 0.94
DDX41-217ENST00000515562 APPP05067 770 aa20.9■□□□□ 0.94
DDX41-217ENST00000515562 HDAC1Q13547 482 aaPredicted RBP20.9■□□□□ 0.94
DDX41-217ENST00000515562 AAMPQ13685 434 aa20.9■□□□□ 0.94
DDX41-217ENST00000515562 MOV10L1Q9BXT6 1211 aaKnown RBP20.9■□□□□ 0.94
DDX41-217ENST00000515562 NACAP1Q9BZK3 213 aa20.9■□□□□ 0.94
DDX41-217ENST00000515562 OGDHLQ9ULD0 1010 aa20.9■□□□□ 0.94
DDX41-217ENST00000515562 COLQQ9Y215 455 aaPredicted RBP20.9■□□□□ 0.94
DDX41-217ENST00000515562 SALL3Q9BXA9 1300 aa20.89■□□□□ 0.93
DDX41-217ENST00000515562 STRNO43815 780 aa20.89■□□□□ 0.93
DDX41-217ENST00000515562 EVI5O60447 810 aa20.89■□□□□ 0.93
DDX41-217ENST00000515562 RASA1P20936 1047 aa20.89■□□□□ 0.93
DDX41-217ENST00000515562 MFSD14CQ5VZR4 134 aa20.89■□□□□ 0.93
DDX41-217ENST00000515562 DIS3LQ8TF46 1054 aaKnown RBP20.89■□□□□ 0.93
DDX41-217ENST00000515562 YTHDC1Q96MU7 727 aaKnown RBP20.89■□□□□ 0.93
DDX41-217ENST00000515562 NBPF3Q9H094 633 aa20.89■□□□□ 0.93
DDX41-217ENST00000515562 CEP290O15078 2479 aa20.89■□□□□ 0.93
DDX41-217ENST00000515562 PATL2C9JE40 543 aaKnown RBP20.88■□□□□ 0.93
DDX41-217ENST00000515562 ATG4CQ96DT6 458 aa20.88■□□□□ 0.93
DDX41-217ENST00000515562 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.88■□□□□ 0.93
DDX41-217ENST00000515562 MROH8Q9H579 483 aa20.88■□□□□ 0.93
DDX41-217ENST00000515562 ERCC3P19447 782 aa20.87■□□□□ 0.93
DDX41-217ENST00000515562 PLS1Q14651 629 aa20.87■□□□□ 0.93
DDX41-217ENST00000515562 ZMYM1Q5SVZ6 1142 aa20.87■□□□□ 0.93
DDX41-217ENST00000515562 ANKRD45Q5TZF3 282 aa20.87■□□□□ 0.93
DDX41-217ENST00000515562 IFNL3Q8IZI9 196 aa20.87■□□□□ 0.93
DDX41-217ENST00000515562 FRMPD3Q5JV73 1810 aa20.87■□□□□ 0.93
DDX41-217ENST00000515562 RAD21O60216 631 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 ADORA2AP29274 412 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 CCND3P30281 292 aaPredicted RBP20.86■□□□□ 0.93
DDX41-217ENST00000515562 CHRDL2Q6WN34 429 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 DPP9Q86TI2 863 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 ABRAQ8N0Z2 381 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 STK11IPQ8N1F8 1099 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 C11orf49Q9H6J7 331 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 SLC5A4Q9NY91 659 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 FLRT1Q9NZU1 646 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 NYAP2Q9P242 653 aa20.86■□□□□ 0.93
DDX41-217ENST00000515562 ALPK3Q96L96 1907 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms