RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 ATP2B2Q01814 1243 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 NTRK3Q16288 839 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 NOL9Q5SY16 702 aaKnown RBP19.62■□□□□ 0.73
AP3S1-208ENST00000515066 ACER1Q8TDN7 264 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 GPBP1L1Q9HC44 474 aaPredicted RBP19.62■□□□□ 0.73
AP3S1-208ENST00000515066 DAXXQ9UER7 740 aaPredicted RBP19.62■□□□□ 0.73
AP3S1-208ENST00000515066 CALM1P0DP23 149 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 CALM2P0DP24 149 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 CALM3P0DP25 149 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 SNHG28P0DPA3 235 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 PDHBP11177 359 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 NF2P35240 595 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 MAP3K11Q16584 847 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 RTN1Q16799 776 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 MOB2Q70IA6 237 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 NSUN7Q8NE18 718 aaKnown RBP19.62■□□□□ 0.73
AP3S1-208ENST00000515066 MAP3K14Q99558 947 aa19.62■□□□□ 0.73
AP3S1-208ENST00000515066 KIF3CO14782 793 aa19.61■□□□□ 0.73
AP3S1-208ENST00000515066 ITGBL1O95965 494 aaPredicted RBP19.61■□□□□ 0.73
AP3S1-208ENST00000515066 HSP90AA1P07900 732 aaKnown RBP19.61■□□□□ 0.73
AP3S1-208ENST00000515066 VGLL4Q14135 290 aa19.61■□□□□ 0.73
AP3S1-208ENST00000515066 SYNPO2Q9UMS6 1093 aa19.61■□□□□ 0.73
AP3S1-208ENST00000515066 JAK2O60674 1132 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 PTPRAP18433 802 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 DDIT3P35638 169 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 GRM4Q14833 912 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 CHADLQ6NUI6 762 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 SMARCC2Q8TAQ2 1214 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 MAD2L2Q9UI95 211 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 MTMR7Q9Y216 660 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 TMX2Q9Y320 296 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 SNCAIPQ9Y6H5 919 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 PARP14Q460N5 1801 aa19.6■□□□□ 0.73
AP3S1-208ENST00000515066 PPFIA3O75145 1194 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 IREB2P48200 963 aaKnown RBP19.59■□□□□ 0.73
AP3S1-208ENST00000515066 MAP3K9P80192 1104 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 PPP2R5BQ15173 497 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 STAG2Q8N3U4 1231 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 CHMP4CQ96CF2 233 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 LLPHQ9BRT6 129 aaKnown RBP19.59■□□□□ 0.73
AP3S1-208ENST00000515066 ARHGEF10LQ9HCE6 1279 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.59■□□□□ 0.73
AP3S1-208ENST00000515066 USP17L5A8MUK1 530 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 PLEKHA8P1O95397 391 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 FUT2Q10981 343 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 KIAA1755Q5JYT7 1200 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 USP17L2Q6R6M4 530 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 CMTR1Q8N1G2 835 aaKnown RBP19.59■□□□□ 0.73
AP3S1-208ENST00000515066 GMCL1P1Q8NEA9 526 aa19.59■□□□□ 0.73
AP3S1-208ENST00000515066 CTCFLQ8NI51 663 aaPredicted RBP19.59■□□□□ 0.73
AP3S1-208ENST00000515066 CCDC196A0A1B0GTZ2 297 aa19.58■□□□□ 0.72
AP3S1-208ENST00000515066 PTPDC1A2A3K4 754 aa19.58■□□□□ 0.72
AP3S1-208ENST00000515066 PALM3A6NDB9 673 aaPredicted RBP19.58■□□□□ 0.72
AP3S1-208ENST00000515066 DHX16O60231 1041 aaKnown RBP19.58■□□□□ 0.72
AP3S1-208ENST00000515066 SLC35G1Q2M3R5 365 aa19.58■□□□□ 0.72
AP3S1-208ENST00000515066 TMTC3Q6ZXV5 915 aa19.58■□□□□ 0.72
AP3S1-208ENST00000515066 NBPF11Q86T75 865 aa19.58■□□□□ 0.72
AP3S1-208ENST00000515066 CLMNQ96JQ2 1002 aa19.58■□□□□ 0.72
AP3S1-208ENST00000515066 PICK1Q9NRD5 415 aa19.58■□□□□ 0.72
AP3S1-208ENST00000515066 RBM28Q9NW13 759 aaKnown RBP19.58■□□□□ 0.72
AP3S1-208ENST00000515066 F5H6K3 240 aa19.57■□□□□ 0.72
AP3S1-208ENST00000515066 CPLX1O14810 134 aa19.57■□□□□ 0.72
AP3S1-208ENST00000515066 NDUFB10O96000 172 aa19.57■□□□□ 0.72
AP3S1-208ENST00000515066 IFNAR1P17181 557 aa19.57■□□□□ 0.72
AP3S1-208ENST00000515066 KLRC3Q07444 240 aa19.57■□□□□ 0.72
AP3S1-208ENST00000515066 LDLRAD1Q5T700 205 aa19.57■□□□□ 0.72
AP3S1-208ENST00000515066 WDR18Q9BV38 432 aa19.57■□□□□ 0.72
AP3S1-208ENST00000515066 ZNF408Q9H9D4 720 aa19.57■□□□□ 0.72
AP3S1-208ENST00000515066 GOLGA8HP0CJ92 632 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 FDPSP14324 419 aaKnown RBP19.56■□□□□ 0.72
AP3S1-208ENST00000515066 GJB2P29033 226 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 KIF5BP33176 963 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 ZNF543Q08ER8 600 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 TTLL12Q14166 644 aaPredicted RBP19.56■□□□□ 0.72
AP3S1-208ENST00000515066 ANKRD13AQ8IZ07 590 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 SRBD1Q8N5C6 995 aaKnown RBP19.56■□□□□ 0.72
AP3S1-208ENST00000515066 PHKBQ93100 1093 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 SMC3Q9UQE7 1217 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 LOC285556D6RIA3 1793 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 CNTNAP5Q8WYK1 1306 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 RLFQ13129 1914 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 PARP1P09874 1014 aaKnown RBP19.56■□□□□ 0.72
AP3S1-208ENST00000515066 ARMC9Q7Z3E5 817 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 CNKSR2Q8WXI2 1034 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 GMCL1Q96IK5 515 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 KIAA1683Q9H0B3 1180 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 VCPKMTQ9H867 229 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 CSADQ9Y600 493 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 ZHX2Q9Y6X8 837 aa19.56■□□□□ 0.72
AP3S1-208ENST00000515066 FRMPD2Q68DX3 1309 aaPredicted RBP19.55■□□□□ 0.72
AP3S1-208ENST00000515066 UBE2Q2LH0YL09 131 aa19.55■□□□□ 0.72
AP3S1-208ENST00000515066 CELF2O95319 508 aaKnown RBP19.55■□□□□ 0.72
AP3S1-208ENST00000515066 SPP2Q13103 211 aa19.55■□□□□ 0.72
AP3S1-208ENST00000515066 CST9Q5W186 159 aa19.55■□□□□ 0.72
AP3S1-208ENST00000515066 SLFN13Q68D06 897 aa19.55■□□□□ 0.72
AP3S1-208ENST00000515066 SPICE1Q8N0Z3 855 aa19.55■□□□□ 0.72
AP3S1-208ENST00000515066 CCDC82Q8N4S0 544 aa19.55■□□□□ 0.72
AP3S1-208ENST00000515066 DDX11Q96FC9 970 aa19.55■□□□□ 0.72
AP3S1-208ENST00000515066 SH2D4AQ9H788 454 aa19.55■□□□□ 0.72
AP3S1-208ENST00000515066 PASKQ96RG2 1323 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms