RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 ORC3Q9UBD5 711 aaPredicted RBP22.93■■□□□ 1.26
SSBP2-218ENST00000514493 SSC5DA1L4H1 1573 aa22.92■■□□□ 1.26
SSBP2-218ENST00000514493 IQCA1LA6NCM1 817 aa22.92■■□□□ 1.26
SSBP2-218ENST00000514493 PPFIA3O75145 1194 aa22.92■■□□□ 1.26
SSBP2-218ENST00000514493 ICA1Q05084 483 aa22.92■■□□□ 1.26
SSBP2-218ENST00000514493 LRRC47Q8N1G4 583 aaKnown RBP22.92■■□□□ 1.26
SSBP2-218ENST00000514493 HOOK2Q96ED9 719 aa22.92■■□□□ 1.26
SSBP2-218ENST00000514493 GPBP1L1Q9HC44 474 aaPredicted RBP22.92■■□□□ 1.26
SSBP2-218ENST00000514493 NYAP2Q9P242 653 aa22.92■■□□□ 1.26
SSBP2-218ENST00000514493 VPS37CA5D8V6 355 aaPredicted RBP22.91■■□□□ 1.26
SSBP2-218ENST00000514493 F13A1P00488 732 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 JAG1P78504 1218 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 NBPF12Q5TAG4 269 aaPredicted RBP22.91■■□□□ 1.26
SSBP2-218ENST00000514493 PHKBQ93100 1093 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 CLIP2Q9UDT6 1046 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 ZBTB21Q9ULJ3 1066 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 MYH15Q9Y2K3 1946 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 FMNL1O95466 1100 aaPredicted RBP22.91■■□□□ 1.26
SSBP2-218ENST00000514493 PTMSP20962 102 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 DCAF15Q66K64 600 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 NBPF11Q86T75 865 aa22.91■■□□□ 1.26
SSBP2-218ENST00000514493 PAPPA2Q9BXP8 1791 aa22.9■■□□□ 1.26
SSBP2-218ENST00000514493 PHF20L1A8MW92 1017 aa22.9■■□□□ 1.26
SSBP2-218ENST00000514493 PLEKHA8P1O95397 391 aa22.9■■□□□ 1.26
SSBP2-218ENST00000514493 CAP2P40123 477 aa22.9■■□□□ 1.26
SSBP2-218ENST00000514493 SSRP1Q08945 709 aaKnown RBP22.9■■□□□ 1.26
SSBP2-218ENST00000514493 FUT2Q10981 343 aa22.9■■□□□ 1.26
SSBP2-218ENST00000514493 TAF1DQ9H5J8 278 aaPredicted RBP22.9■■□□□ 1.26
SSBP2-218ENST00000514493 CNTNAP5Q8WYK1 1306 aa22.89■■□□□ 1.26
SSBP2-218ENST00000514493 EEF2P13639 858 aaKnown RBP22.89■■□□□ 1.26
SSBP2-218ENST00000514493 TRIM22Q8IYM9 498 aa22.89■■□□□ 1.26
SSBP2-218ENST00000514493 ZC3H15Q8WU90 426 aaKnown RBP22.89■■□□□ 1.26
SSBP2-218ENST00000514493 MKL1Q969V6 931 aa22.89■■□□□ 1.26
SSBP2-218ENST00000514493 DCPSQ96C86 337 aaKnown RBP22.89■■□□□ 1.26
SSBP2-218ENST00000514493 SLC26A6Q9BXS9 759 aa22.89■■□□□ 1.26
SSBP2-218ENST00000514493 RNF26Q9BY78 433 aaPredicted RBP22.89■■□□□ 1.26
SSBP2-218ENST00000514493 MAD2L2Q9UI95 211 aa22.89■■□□□ 1.26
SSBP2-218ENST00000514493 ATP6V1DQ9Y5K8 247 aa22.89■■□□□ 1.26
SSBP2-218ENST00000514493 OTOFQ9HC10 1997 aa22.89■■□□□ 1.25
SSBP2-218ENST00000514493 TCHHQ07283 1943 aa22.89■■□□□ 1.25
SSBP2-218ENST00000514493 ATP2B2Q01814 1243 aa22.89■■□□□ 1.25
SSBP2-218ENST00000514493 CDC37L1Q7L3B6 337 aa22.89■■□□□ 1.25
SSBP2-218ENST00000514493 PALM3A6NDB9 673 aaPredicted RBP22.88■■□□□ 1.25
SSBP2-218ENST00000514493 SNHG28P0DPA3 235 aa22.88■■□□□ 1.25
SSBP2-218ENST00000514493 PDHBP11177 359 aa22.88■■□□□ 1.25
SSBP2-218ENST00000514493 GNAQP50148 359 aa22.88■■□□□ 1.25
SSBP2-218ENST00000514493 MCTP1Q6DN14 999 aa22.88■■□□□ 1.25
SSBP2-218ENST00000514493 RASGRP2Q7LDG7 609 aa22.88■■□□□ 1.25
SSBP2-218ENST00000514493 SULF1Q8IWU6 871 aa22.88■■□□□ 1.25
SSBP2-218ENST00000514493 CMTR1Q8N1G2 835 aaKnown RBP22.88■■□□□ 1.25
SSBP2-218ENST00000514493 SYNPO2Q9UMS6 1093 aa22.88■■□□□ 1.25
SSBP2-218ENST00000514493 MTMR7Q9Y216 660 aa22.88■■□□□ 1.25
SSBP2-218ENST00000514493 KIF3CO14782 793 aa22.87■■□□□ 1.25
SSBP2-218ENST00000514493 SIAH1Q8IUQ4 282 aa22.87■■□□□ 1.25
SSBP2-218ENST00000514493 STAG2Q8N3U4 1231 aa22.87■■□□□ 1.25
SSBP2-218ENST00000514493 SRBD1Q8N5C6 995 aaKnown RBP22.87■■□□□ 1.25
SSBP2-218ENST00000514493 ZNF341Q9BYN7 854 aa22.87■■□□□ 1.25
SSBP2-218ENST00000514493 GINM1Q9NU53 330 aa22.87■■□□□ 1.25
SSBP2-218ENST00000514493 ASNSP08243 561 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 PARP1P09874 1014 aaKnown RBP22.86■■□□□ 1.25
SSBP2-218ENST00000514493 POTEIP0CG38 1075 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 POTEJP0CG39 1038 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 VEGFAP15692 232 aaPredicted RBP22.86■■□□□ 1.25
SSBP2-218ENST00000514493 PRAMEF18Q5VWM3 479 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 PHIPQ8WWQ0 1821 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 H3BQV1 296 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 DEXIO95424 95 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 ASPRV1Q53RT3 343 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 IFFO2Q5TF58 517 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 CCDC82Q8N4S0 544 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 RGS22Q8NE09 1264 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 WASF1Q92558 559 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 LZTS2Q9BRK4 669 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 ALG1Q9BT22 464 aa22.86■■□□□ 1.25
SSBP2-218ENST00000514493 USP17L5A8MUK1 530 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 ADM5C9JUS6 153 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 CTNND1O60716 968 aaKnown RBP22.85■■□□□ 1.25
SSBP2-218ENST00000514493 SUPT20HL1Q3ZLR7 823 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 USP17L2Q6R6M4 530 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 KRT26Q7Z3Y9 468 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 PNMA8AQ86V59 439 aaPredicted RBP22.85■■□□□ 1.25
SSBP2-218ENST00000514493 GMCL1P1Q8NEA9 526 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 C8orf76Q96K31 380 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 ARHGEF10LQ9HCE6 1279 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 ZNF112Q9UJU3 913 aa22.85■■□□□ 1.25
SSBP2-218ENST00000514493 PRPF3O43395 683 aaKnown RBP22.84■■□□□ 1.25
SSBP2-218ENST00000514493 FOSBP53539 338 aa22.84■■□□□ 1.25
SSBP2-218ENST00000514493 UBE2Q2LH0YL09 131 aa22.84■■□□□ 1.25
SSBP2-218ENST00000514493 AKAP17AQ02040 695 aaKnown RBP22.84■■□□□ 1.25
SSBP2-218ENST00000514493 EAPPQ56P03 285 aaPredicted RBP22.84■■□□□ 1.25
SSBP2-218ENST00000514493 CHAMP1Q96JM3 812 aa22.84■■□□□ 1.25
SSBP2-218ENST00000514493 AIFM3Q96NN9 605 aa22.84■■□□□ 1.25
SSBP2-218ENST00000514493 SPZ1Q9BXG8 430 aa22.84■■□□□ 1.25
SSBP2-218ENST00000514493 RBM27Q9P2N5 1060 aaKnown RBP22.84■■□□□ 1.25
SSBP2-218ENST00000514493 KLRF2D3W0D1 207 aa22.83■■□□□ 1.24
SSBP2-218ENST00000514493 GOLGA8HP0CJ92 632 aa22.83■■□□□ 1.24
SSBP2-218ENST00000514493 ZNF543Q08ER8 600 aa22.83■■□□□ 1.24
SSBP2-218ENST00000514493 DCAF4Q8WV16 495 aa22.83■■□□□ 1.24
SSBP2-218ENST00000514493 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.83■■□□□ 1.24
SSBP2-218ENST00000514493 A0A1W2PRG0 241 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms