RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 KIAA1755Q5JYT7 1200 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 PLEKHH3Q7Z736 793 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 LPAR1Q92633 364 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 SH2D4AQ9H788 454 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 BTBD7Q9P203 1132 aa12.54□□□□□ -0.4
HMGXB3-205ENST00000514469 KIAA0100Q14667 2235 aaKnown RBP12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 RLFQ13129 1914 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 FARP2O94887 1054 aaPredicted RBP12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 SLC34A2O95436 690 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 CYP2B6P20813 491 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 RASA1P20936 1047 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 AAMPQ13685 434 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 MAP3K21Q5TCX8 1036 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 TRMT44Q8IYL2 757 aaKnown RBP12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 DEFB118Q96PH6 123 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 APBA2Q99767 749 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 FSD1Q9BTV5 496 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 TANGO6Q9C0B7 1094 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
HMGXB3-205ENST00000514469 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 EEF2P13639 858 aaKnown RBP12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 RGS2P41220 211 aa12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 COG2Q14746 738 aa12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 ZMYM1Q5SVZ6 1142 aa12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 SEC62Q99442 399 aaKnown RBP12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 KANSL2Q9H9L4 492 aa12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 STAP2Q9UGK3 403 aa12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 PARP14Q460N5 1801 aa12.52□□□□□ -0.41
HMGXB3-205ENST00000514469 SLC15A5A6NIM6 579 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 TDO2P48775 406 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 GRB14Q14449 540 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 ANKRD45Q5TZF3 282 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 SPICE1Q8N0Z3 855 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 MB21D1Q8N884 522 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 CWC22Q9HCG8 908 aaKnown RBP12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 HOXC10Q9NYD6 342 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 PLIN4Q96Q06 1357 aa12.51□□□□□ -0.41
HMGXB3-205ENST00000514469 IGKV6D-41A0A0C4DH26 115 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 MINDY4BA8MYZ0 360 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 PATL2C9JE40 543 aaKnown RBP12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 FLOT1O75955 427 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 TFRCP02786 760 aaKnown RBP12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 HOXC6P09630 235 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 PTPREP23469 700 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 DSG3P32926 999 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 CCL14Q16627 93 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 IFNL3Q8IZI9 196 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 HTATIP2Q9BUP3 242 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 MOV10L1Q9BXT6 1211 aaKnown RBP12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 SPATC1LQ9H0A9 340 aa12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
HMGXB3-205ENST00000514469 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 FOXP2O15409 715 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 APPP05067 770 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 PDE1AP54750 535 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 ATP2B2Q01814 1243 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 CACNB2Q08289 660 aaPredicted RBP12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 WDR78Q5VTH9 848 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 EVI5LQ96CN4 794 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 NACAP1Q9BZK3 213 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 MKNK2Q9HBH9 465 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 GOPCQ9HD26 462 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 IVNS1ABPQ9Y6Y0 642 aa12.49□□□□□ -0.41
HMGXB3-205ENST00000514469 H0YGN5 161 aa12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 IGHA2P01877 340 aa12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 SMC5Q8IY18 1101 aa12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 STK11IPQ8N1F8 1099 aa12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 DIS3LQ8TF46 1054 aaKnown RBP12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 ZNF287Q9HBT7 754 aa12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 FLRT1Q9NZU1 646 aa12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 ADAMTS5Q9UNA0 930 aa12.48□□□□□ -0.41
HMGXB3-205ENST00000514469 PRDM1O75626 825 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 ERCC3P19447 782 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 ADORA2AP29274 412 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 PPARAQ07869 468 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 TMEM132BQ14DG7 1078 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 HABP4Q5JVS0 413 aaKnown RBP12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 CCDC129Q6ZRS4 1044 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 TICAM2Q86XR7 235 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 DPF3Q92784 378 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 PAWRQ96IZ0 340 aaKnown RBP12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 NAPBQ9H115 298 aa12.47□□□□□ -0.41
HMGXB3-205ENST00000514469 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms