RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	ZIC5	Q96T25	663 aa		11.63	□□□□□ -0.55
RACK1-233	ENST00000514455	KIAA1683	Q9H0B3	1180 aa		11.63	□□□□□ -0.55
RACK1-233	ENST00000514455	TMOD4	Q9NZQ9	345 aa		11.63	□□□□□ -0.55
RACK1-233	ENST00000514455	CCL15-CCL14	A0A0B4J2E2	113 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455		A0A0G2JLL6	359 aa	Predicted RBP	11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	TESPA1	A2RU30	521 aa	Predicted RBP	11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	PRC1	O43663	620 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	TOP1	P11387	765 aa	Known RBP	11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	CAST	P20810	708 aa	Known RBP	11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	TM4SF4	P48230	202 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	HMGCS2	P54868	508 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	ANTXR2	P58335	489 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	ZYX	Q15942	572 aa	Known RBP	11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	CCL15	Q16663	113 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	RCSD1	Q6JBY9	416 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	TMTC2	Q8N394	836 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	DNAJC5G	Q8N7S2	189 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	IGDCC4	Q8TDY8	1250 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	TMEM87B	Q96K49	555 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	TMEM47	Q9BQJ4	181 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	TM6SF1	Q9BZW5	370 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	VCPKMT	Q9H867	229 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	ZSWIM6	Q9HCJ5	1215 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	EMILIN3	Q9NT22	766 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	SYNPO2	Q9UMS6	1093 aa		11.62	□□□□□ -0.55
RACK1-233	ENST00000514455	TNKS	O95271	1327 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455		F5H6K3	240 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	RAD21	O60216	631 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	CPA1	P15085	419 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	RBM25	P49756	843 aa	Known RBP	11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	KLRC3	Q07444	240 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	SREBF2	Q12772	1141 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	COL9A3	Q14050	684 aa	Predicted RBP	11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	WTAP	Q15007	396 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	SEC23A	Q15436	765 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	TMEM67	Q5HYA8	995 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	IFIT1B	Q5T764	474 aa	Known RBP	11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	OTUD7B	Q6GQQ9	843 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	GADL1	Q6ZQY3	521 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	RUFY3	Q7L099	469 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	ENAH	Q8N8S7	591 aa	Predicted RBP	11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	BRI3BP	Q8WY22	251 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	IL17RA	Q96F46	866 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	KAT14	Q9H8E8	782 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	GOPC	Q9HD26	462 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	CYP46A1	Q9Y6A2	500 aa		11.61	□□□□□ -0.55
RACK1-233	ENST00000514455	WDR19	Q8NEZ3	1342 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	PHIP	Q8WWQ0	1821 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	BTBD19	C9JJ37	291 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	RPS6KB1	P23443	525 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	FGD1	P98174	961 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	MOGS	Q13724	837 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	KIAA1755	Q5JYT7	1200 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	SLFN13	Q68D06	897 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	LRRC47	Q8N1G4	583 aa	Known RBP	11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	GMCL1P1	Q8NEA9	526 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	LPAR1	Q92633	364 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	C12orf42	Q96LP6	360 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	TCEANC2	Q96MN5	208 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	PTPN18	Q99952	460 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	LRRC2	Q9BYS8	371 aa		11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	GREB1L	Q9C091	1923 aa	Predicted RBP	11.6	□□□□□ -0.55
RACK1-233	ENST00000514455	NDUFB10	O96000	172 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	LIFR	P42702	1097 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.59	□□□□□ -0.55	9e-42	■□□□□ 8.9
RACK1-233	ENST00000514455	DGKZ	Q13574	1117 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	GPAT2	Q6NUI2	795 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455		Q6ZUG5	572 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	ANKRD23	Q86SG2	305 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	IFNL1	Q8IU54	200 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	SPICE1	Q8N0Z3	855 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	PNMA1	Q8ND90	353 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	UPF3B	Q9BZI7	483 aa	Known RBP	11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	GPHN	Q9NQX3	736 aa	Predicted RBP	11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	PDRG1	Q9NUG6	133 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	AGTPBP1	Q9UPW5	1226 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	MTMR7	Q9Y216	660 aa		11.59	□□□□□ -0.55
RACK1-233	ENST00000514455	CCDC69	A6NI79	296 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L15	C9J2P7	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L13	C9JLJ4	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L11	C9JVI0	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L18	D6R9N7	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L22	D6RA61	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L17	D6RBQ6	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L19	D6RCP7	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L20	D6RJB6	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	PDHX	O00330	501 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	SH2B2	O14492	632 aa	Predicted RBP	11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	WDR46	O15213	610 aa	Known RBP	11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	ALDH1A1	P00352	501 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	VCAM1	P19320	739 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	OSBP	P22059	807 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	HOXA7	P31268	230 aa	Predicted RBP	11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	SLC1A4	P43007	532 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	USP17L24	Q0WX57	530 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	TREML2	Q5T2D2	321 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	NFXL1	Q6ZNB6	911 aa		11.58	□□□□□ -0.56
RACK1-233	ENST00000514455	CATSPERG	Q6ZRH7	1159 aa		11.58	□□□□□ -0.56

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