RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 Q3C1V9 767 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 TMEM67Q5HYA8 995 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 FAM47AQ5JRC9 791 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 OTOP2Q7RTS6 562 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 ZNF280CQ8ND82 737 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 METTL22Q9BUU2 404 aaPredicted RBP9.73□□□□□ -0.85
CLDND1-229ENST00000513988 PPP1R12CQ9BZL4 782 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 RBPJLQ9UBG7 517 aa9.73□□□□□ -0.85
CLDND1-229ENST00000513988 ANKRD18BA2A2Z9 1011 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 FRAT2O75474 233 aaPredicted RBP9.72□□□□□ -0.85
CLDND1-229ENST00000513988 HOXC6P09630 235 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 ZP2Q05996 745 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 CDC42EP5Q6NZY7 148 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 RNF180Q86T96 592 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 NPLOC4Q8TAT6 608 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 FAM198AQ9UFP1 575 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 IQSEC3Q9UPP2 1182 aaPredicted RBP9.72□□□□□ -0.85
CLDND1-229ENST00000513988 IVNS1ABPQ9Y6Y0 642 aa9.72□□□□□ -0.85
CLDND1-229ENST00000513988 KMT2EQ8IZD2 1858 aa9.71□□□□□ -0.85
CLDND1-229ENST00000513988 TMEM221A6NGB7 291 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 ZBBXA8MT70 800 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 H0Y858 1186 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 M0R296 226 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 HOXB7P09629 217 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 HOXB3P14651 431 aaPredicted RBP9.71□□□□□ -0.86
CLDND1-229ENST00000513988 ATP2A2P16615 1042 aaKnown RBP9.71□□□□□ -0.86
CLDND1-229ENST00000513988 PTPREP23469 700 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 CCNA1P78396 465 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 HERC4Q5GLZ8 1057 aaPredicted RBP9.71□□□□□ -0.86
CLDND1-229ENST00000513988 UBE3BQ7Z3V4 1068 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 ZSCAN29Q8IWY8 852 aaPredicted RBP9.71□□□□□ -0.86
CLDND1-229ENST00000513988 ZFPM1Q8IX07 1006 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 ADSSL1Q8N142 457 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 FBXL6Q8N531 539 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 FBXO22Q8NEZ5 403 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 GTF3C2Q8WUA4 911 aaPredicted RBP9.71□□□□□ -0.86
CLDND1-229ENST00000513988 RMDN1Q96DB5 314 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.86
CLDND1-229ENST00000513988 TBC1D2Q9BYX2 928 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 PHAXQ9H814 394 aaKnown RBP9.71□□□□□ -0.86
CLDND1-229ENST00000513988 XPNPEP3Q9NQH7 507 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 STARD7Q9NQZ5 370 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 TLR9Q9NR96 1032 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 PRKAG3Q9UGI9 489 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 MUTYHQ9UIF7 546 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 RALYQ9UKM9 306 aaKnown RBP9.71□□□□□ -0.86
CLDND1-229ENST00000513988 FAM50BQ9Y247 325 aa9.71□□□□□ -0.86
CLDND1-229ENST00000513988 HOXA7P31268 230 aaPredicted RBP9.7□□□□□ -0.86
CLDND1-229ENST00000513988 IRS1P35568 1242 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 VPS37DQ86XT2 251 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 NUP133Q8WUM0 1156 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 EDAQ92838 391 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 MFRPQ9BY79 579 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 ALG13Q9NP73 1137 aaKnown RBP9.7□□□□□ -0.86
CLDND1-229ENST00000513988 TMOD4Q9NZQ9 345 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 LMCD1Q9NZU5 365 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 SUGT1Q9Y2Z0 365 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 MROH7Q68CQ1 1323 aa9.7□□□□□ -0.86
CLDND1-229ENST00000513988 DNAH14Q0VDD8 3507 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 SPTBN2O15020 2390 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
CLDND1-229ENST00000513988 DDX58O95786 925 aaKnown RBP9.69□□□□□ -0.86
CLDND1-229ENST00000513988 PGK1P00558 417 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 IGHA2P01877 340 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 RARBP10826 455 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 CYP2C18P33260 490 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 MAP3K10Q02779 954 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 TAP1Q03518 808 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 EP300Q09472 2414 aaPredicted RBP9.69□□□□□ -0.86
CLDND1-229ENST00000513988 GRB14Q14449 540 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 OLFML2BQ68BL8 750 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 TRIM67Q6ZTA4 783 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 ADHFE1Q8IWW8 467 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 USP40Q9NVE5 1235 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 MAPK8IP3Q9UPT6 1336 aa9.69□□□□□ -0.86
CLDND1-229ENST00000513988 FLNBO75369 2602 aaKnown RBP9.69□□□□□ -0.86
CLDND1-229ENST00000513988 COL4A4P53420 1690 aaPredicted RBP9.68□□□□□ -0.86
CLDND1-229ENST00000513988 LPXNO60711 386 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 KDM4AO75164 1064 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 IGKV5-2P06315 115 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 CSF1RP07333 972 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 HSPA5P11021 654 aaKnown RBP9.68□□□□□ -0.86
CLDND1-229ENST00000513988 NBL1P41271 181 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 RGS3P49796 1198 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 UBE4AQ14139 1066 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 PRAMEF19Q5SWL8 479 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 DPP9Q86TI2 863 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 NKD2Q969F2 451 aaPredicted RBP9.68□□□□□ -0.86
CLDND1-229ENST00000513988 PLA2G12BQ9BX93 195 aa9.68□□□□□ -0.86
CLDND1-229ENST00000513988 USP17L5A8MUK1 530 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 H3BQ06 376 aaPredicted RBP9.67□□□□□ -0.86
CLDND1-229ENST00000513988 H7C1W4 665 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 TLR3O15455 904 aaKnown RBP9.67□□□□□ -0.86
CLDND1-229ENST00000513988 ENTPD3O75355 529 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 ACLYP53396 1101 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 EMP3P54852 163 aa9.67□□□□□ -0.86
CLDND1-229ENST00000513988 VCPP55072 806 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms