RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 HMGCS2P54868 508 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 SP3Q02447 781 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 ICA1Q05084 483 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 PPARAQ07869 468 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 MTMR2Q13614 643 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 RAB3GAP1Q15042 981 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 CWC27Q6UX04 472 aaKnown RBP9.73□□□□□ -0.85
NEDD4-210ENST00000513957 GADL1Q6ZQY3 521 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 ZNF296Q8WUU4 475 aaPredicted RBP9.73□□□□□ -0.85
NEDD4-210ENST00000513957 DYNLL2Q96FJ2 89 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 FEZ1Q99689 392 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 MKNK2Q9HBH9 465 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 PPP4R2Q9NY27 417 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 TSKSQ9UJT2 592 aa9.73□□□□□ -0.85
NEDD4-210ENST00000513957 RLFQ13129 1914 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 C19orf67A6NJJ6 358 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 FOXP2O15409 715 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 FGRP09769 529 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 C17orf99Q6UX52 265 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 CCDC129Q6ZRS4 1044 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 CTU1Q7Z7A3 348 aaKnown RBP9.72□□□□□ -0.85
NEDD4-210ENST00000513957 ZNF589Q86UQ0 364 aaPredicted RBP9.72□□□□□ -0.85
NEDD4-210ENST00000513957 ZNF444Q8N0Y2 327 aaPredicted RBP9.72□□□□□ -0.85
NEDD4-210ENST00000513957 CCDC82Q8N4S0 544 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 SLC44A5Q8NCS7 719 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 SMCR8Q8TEV9 937 aaPredicted RBP9.72□□□□□ -0.85
NEDD4-210ENST00000513957 RNF41Q9H4P4 317 aaPredicted RBP9.72□□□□□ -0.85
NEDD4-210ENST00000513957 CTNNA3Q9UI47 895 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 TMX2Q9Y320 296 aa9.72□□□□□ -0.85
NEDD4-210ENST00000513957 CYP2D7A0A087X1C5 515 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 ORC4O43929 436 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 FGAP02671 866 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 AKR1B1P15121 316 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 RASA1P20936 1047 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 CHMLP26374 656 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 GUCY1A2P33402 732 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 PRMT2P55345 433 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 IRX3P78415 501 aaPredicted RBP9.71□□□□□ -0.86
NEDD4-210ENST00000513957 JAG1P78504 1218 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 KIF22Q14807 665 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 SEPT2Q15019 361 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 FAM110CQ1W6H9 321 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.86
NEDD4-210ENST00000513957 VPS53Q5VIR6 699 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 CASC1Q6TDU7 716 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 LBX2Q6XYB7 198 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 CCDC84Q86UT8 332 aaPredicted RBP9.71□□□□□ -0.86
NEDD4-210ENST00000513957 TRAIPQ9BWF2 469 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 GOPCQ9HD26 462 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 NYAP2Q9P242 653 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.71□□□□□ -0.86
NEDD4-210ENST00000513957 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.71□□□□□ -0.86
NEDD4-210ENST00000513957 MYPNQ86TC9 1320 aa9.71□□□□□ -0.86
NEDD4-210ENST00000513957 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
NEDD4-210ENST00000513957 COL11A1P12107 1806 aaPredicted RBP9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L15C9J2P7 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L13C9JLJ4 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L11C9JVI0 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L18D6R9N7 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L22D6RA61 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L17D6RBQ6 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L19D6RCP7 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L20D6RJB6 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 TRAK2O60296 914 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 TSPY3P0CV98 308 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 TSPY8P0CW00 308 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 BCRP11274 1271 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 VCAM1P19320 739 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 LACTBP83111 547 aaPredicted RBP9.7□□□□□ -0.86
NEDD4-210ENST00000513957 USP17L24Q0WX57 530 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 IMMTQ16891 758 aaKnown RBP9.7□□□□□ -0.86
NEDD4-210ENST00000513957 SHROOM1Q2M3G4 852 aaPredicted RBP9.7□□□□□ -0.86
NEDD4-210ENST00000513957 TREML2Q5T2D2 321 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 TNS4Q8IZW8 715 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 NEDD1Q8NHV4 660 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 STAG1Q8WVM7 1258 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
NEDD4-210ENST00000513957 FAM117AQ9C073 453 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 ASCC2Q9H1I8 757 aaPredicted RBP9.7□□□□□ -0.86
NEDD4-210ENST00000513957 VCPKMTQ9H867 229 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 ZNF236Q9UL36 1845 aa9.7□□□□□ -0.86
NEDD4-210ENST00000513957 IGKV6D-41A0A0C4DH26 115 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 TSPY2A6NKD2 308 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 ZNF213O14771 459 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 WDR46O15213 610 aaKnown RBP9.69□□□□□ -0.86
NEDD4-210ENST00000513957 SGSM2O43147 1006 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 PPP1R37O75864 691 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 TTLL1O95922 423 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 MFSD10Q14728 455 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 AKNAD1Q5T1N1 836 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 MKL1Q969V6 931 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEDD4-210ENST00000513957 R3HDMLQ9H3Y0 253 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 CNNM2Q9H8M5 875 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 TCP11L1Q9NUJ3 509 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 MORF4L1Q9UBU8 362 aa9.69□□□□□ -0.86
NEDD4-210ENST00000513957 ZSWIM8A7E2V4 1837 aa9.68□□□□□ -0.86
NEDD4-210ENST00000513957 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
NEDD4-210ENST00000513957 CYP2C8P10632 490 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms