RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 SYNE3Q6ZMZ3 975 aa18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 GADL1Q6ZQY3 521 aa18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 LRRC47Q8N1G4 583 aaKnown RBP18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 ACER1Q8TDN7 264 aa18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 ANKS1AQ92625 1134 aa18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 LPAR1Q92633 364 aa18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 IL17RAQ96F46 866 aa18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 TMEM47Q9BQJ4 181 aa18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 PDRG1Q9NUG6 133 aa18.45■□□□□ 0.54
SH3TC1-223ENST00000513495 CCL15-CCL14A0A0B4J2E2 113 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 A0A0G2JLL6 359 aaPredicted RBP18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 FAM155AB1AL88 458 aaPredicted RBP18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 GJA5P36382 358 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 LIFRP42702 1097 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 NOVP48745 357 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 EXOSC10Q01780 885 aaKnown RBP18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 PABPC4Q13310 644 aaKnown RBP eCLIP18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 RABEP1Q15276 862 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 ANKRD1Q15327 319 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 CCL15Q16663 113 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 SH3D19Q5HYK7 790 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 OTUD7BQ6GQQ9 843 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 PRRT2Q7Z6L0 340 aaPredicted RBP18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 CATIPQ7Z7H3 387 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 PROCA1Q8NCQ7 364 aaPredicted RBP18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 GMCL1P1Q8NEA9 526 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 VCPKMTQ9H867 229 aa18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 WDR33Q9C0J8 1336 aaKnown RBP18.44■□□□□ 0.54
SH3TC1-223ENST00000513495 A0A1W2PRG0 241 aa18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 SH2B2O14492 632 aaPredicted RBP18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 HTRA3P83110 453 aa18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 SEC23AQ15436 765 aa18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 Q6ZUG5 572 aa18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 SIAH1Q8IUQ4 282 aa18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 PNMA1Q8ND90 353 aa18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 IGDCC4Q8TDY8 1250 aa18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 C12orf42Q96LP6 360 aa18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 ISY1Q9ULR0 285 aaKnown RBP18.43■□□□□ 0.54
SH3TC1-223ENST00000513495 F5H6K3 240 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 CPA1P15085 419 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 MAP2K2P36507 400 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 NEK4P51957 841 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 KLRC3Q07444 240 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 SLFN13Q68D06 897 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 RCSD1Q6JBY9 416 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 TCEANC2Q96MN5 208 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 LRRC2Q9BYS8 371 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 LY9Q9HBG7 655 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 SLC12A7Q9Y666 1083 aa18.42■□□□□ 0.54
SH3TC1-223ENST00000513495 PTPRFP10586 1907 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 WDR46O15213 610 aaKnown RBP18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 ST18O60284 1047 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 CALM1P0DP23 149 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 CALM2P0DP24 149 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 CALM3P0DP25 149 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 SLC1A4P43007 532 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 VEGFBP49765 207 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 KIF23Q02241 960 aaPredicted RBP18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 DCAF4Q8WV16 495 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 NAP1L2Q9ULW6 460 aaPredicted RBP18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 MTMR7Q9Y216 660 aa18.41■□□□□ 0.54
SH3TC1-223ENST00000513495 NDUFB10O96000 172 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 VCAM1P19320 739 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 SGMS1Q86VZ5 419 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 SPICE1Q8N0Z3 855 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 FBXL16Q8N461 479 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 BRF1Q92994 677 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 GMCL1Q96IK5 515 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 MS4A4AQ96JQ5 239 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 TANGO6Q9C0B7 1094 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 EMILIN3Q9NT22 766 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 PNMA3Q9UL41 463 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 AGTPBP1Q9UPW5 1226 aa18.4■□□□□ 0.54
SH3TC1-223ENST00000513495 TESPA1A2RU30 521 aaPredicted RBP18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 DDAH1O94760 285 aa18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 OSBPP22059 807 aa18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 ANKRD23Q86SG2 305 aa18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 ZNF654Q8IZM8 581 aa18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 CTCFLQ8NI51 663 aaPredicted RBP18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 BRI3BPQ8WY22 251 aa18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 ALDH8A1Q9H2A2 487 aaPredicted RBP18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 ZCCHC17Q9NP64 241 aaKnown RBP18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 SLC45A1Q9Y2W3 748 aa18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 LOC285556D6RIA3 1793 aa18.39■□□□□ 0.53
SH3TC1-223ENST00000513495 KLF18A0A0U1RQI7 1052 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L15C9J2P7 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L13C9JLJ4 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L11C9JVI0 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L18D6R9N7 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L22D6RA61 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L17D6RBQ6 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L19D6RCP7 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L20D6RJB6 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 AOC2O75106 756 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 ALDH1A1P00352 501 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 BMP3P12645 472 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 KIF5BP33176 963 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms