RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 KIF2CQ99661 725 aa12.2□□□□□ -0.46
PTPN20-227ENST00000513159 TMEM47Q9BQJ4 181 aa12.2□□□□□ -0.46
PTPN20-227ENST00000513159 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
PTPN20-227ENST00000513159 CNNM2Q9H8M5 875 aa12.2□□□□□ -0.46
PTPN20-227ENST00000513159 ZSWIM8A7E2V4 1837 aa12.2□□□□□ -0.46
PTPN20-227ENST00000513159 TNKSO95271 1327 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 CETPP11597 493 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 ATP2B2Q01814 1243 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 RNF20Q5VTR2 975 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 USP17L2Q6R6M4 530 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 SPICE1Q8N0Z3 855 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 NEK1Q96PY6 1258 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 ZSCAN10Q96SZ4 725 aaPredicted RBP12.19□□□□□ -0.46
PTPN20-227ENST00000513159 LRRC2Q9BYS8 371 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 A0A0G2JMZ2 1700 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 MYH6P13533 1939 aa12.19□□□□□ -0.46
PTPN20-227ENST00000513159 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 F5H6K3 240 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 PRC1O43663 620 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 NDUFB10O96000 172 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 VCAM1P19320 739 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 NT5C2P49902 561 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 KLRC3Q07444 240 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 GADL1Q6ZQY3 521 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 ANKRD23Q86SG2 305 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
PTPN20-227ENST00000513159 JAKMIP1Q96N16 626 aaKnown RBP12.18□□□□□ -0.46
PTPN20-227ENST00000513159 TTC14Q96N46 770 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 NUP88Q99567 741 aaPredicted RBP12.18□□□□□ -0.46
PTPN20-227ENST00000513159 LY9Q9HBG7 655 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 ARHGEF10LQ9HCE6 1279 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 WBP1LQ9NX94 342 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 RNF186Q9NXI6 227 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 STX8Q9UNK0 236 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 AGTPBP1Q9UPW5 1226 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 MGAMO43451 1857 aa12.18□□□□□ -0.46
PTPN20-227ENST00000513159 SH2B2O14492 632 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-227ENST00000513159 PEX10O60683 326 aa12.17□□□□□ -0.46
PTPN20-227ENST00000513159 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
PTPN20-227ENST00000513159 ZKSCAN1P17029 563 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-227ENST00000513159 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-227ENST00000513159 MCM5P33992 734 aa12.17□□□□□ -0.46
PTPN20-227ENST00000513159 INHBEP58166 350 aa12.17□□□□□ -0.46
PTPN20-227ENST00000513159 TRDNQ13061 729 aa12.17□□□□□ -0.46
PTPN20-227ENST00000513159 DHX32Q7L7V1 743 aaKnown RBP12.17□□□□□ -0.46
PTPN20-227ENST00000513159 RALYLQ86SE5 291 aaKnown RBP12.17□□□□□ -0.46
PTPN20-227ENST00000513159 CHMP4CQ96CF2 233 aa12.17□□□□□ -0.46
PTPN20-227ENST00000513159 FEZ1Q99689 392 aa12.17□□□□□ -0.46
PTPN20-227ENST00000513159 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
PTPN20-227ENST00000513159 ZNFX1Q9P2E3 1918 aaKnown RBP12.17□□□□□ -0.46
PTPN20-227ENST00000513159 PDHXO00330 501 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 IFIT3O14879 490 aaKnown RBP12.16□□□□□ -0.46
PTPN20-227ENST00000513159 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 CYP2C8P10632 490 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 RPS6KB1P23443 525 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 USP14P54578 494 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 CAP1Q01518 475 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 KRT32Q14532 448 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 FAM83BQ5T0W9 1011 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 CATSPERGQ6ZRH7 1159 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 FASTKD5Q7L8L6 764 aaKnown RBP12.16□□□□□ -0.46
PTPN20-227ENST00000513159 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 GMCL1P1Q8NEA9 526 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 P2RX7Q99572 595 aaKnown RBP12.16□□□□□ -0.46
PTPN20-227ENST00000513159 AGXT2Q9BYV1 514 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 UPF3BQ9BZI7 483 aaKnown RBP12.16□□□□□ -0.46
PTPN20-227ENST00000513159 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 ASCC2Q9H1I8 757 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-227ENST00000513159 RPAP3Q9H6T3 665 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-227ENST00000513159 FBXO28Q9NVF7 368 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 SYNPO2Q9UMS6 1093 aa12.16□□□□□ -0.46
PTPN20-227ENST00000513159 WDR19Q8NEZ3 1342 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 TRPA1O75762 1119 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 TBC1D8O95759 1140 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 PDHBP11177 359 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 CASTP20810 708 aaKnown RBP12.15□□□□□ -0.46
PTPN20-227ENST00000513159 MCCP23508 829 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 RBM25P49756 843 aaKnown RBP12.15□□□□□ -0.46
PTPN20-227ENST00000513159 ANAPC15P60006 121 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 CRHR2Q13324 411 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 SLC35G1Q2M3R5 365 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 TMEM67Q5HYA8 995 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 SLFN13Q68D06 897 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 REM2Q8IYK8 340 aaPredicted RBP12.15□□□□□ -0.46
PTPN20-227ENST00000513159 PNMA1Q8ND90 353 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 LPAR1Q92633 364 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 UBAC1Q9BSL1 405 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 CFHR5Q9BXR6 569 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 C22orf23Q9BZE7 217 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 ZCCHC17Q9NP64 241 aaKnown RBP12.15□□□□□ -0.46
PTPN20-227ENST00000513159 TMOD4Q9NZQ9 345 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 SLC45A1Q9Y2W3 748 aa12.15□□□□□ -0.46
PTPN20-227ENST00000513159 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
PTPN20-227ENST00000513159 CA12O43570 354 aa12.14□□□□□ -0.47
PTPN20-227ENST00000513159 CNMDO75829 334 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms