RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 MEGF11A6BM72 1044 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 NOP56O00567 594 aaKnown RBP9.95□□□□□ -0.82
RFC1-214ENST00000512726 PRODHO43272 600 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 DEAF1O75398 565 aaPredicted RBP9.95□□□□□ -0.82
RFC1-214ENST00000512726 PPM1BO75688 479 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 CST3P01034 146 aaPredicted RBP9.95□□□□□ -0.82
RFC1-214ENST00000512726 PABPC1P11940 636 aaKnown RBP9.95□□□□□ -0.82
RFC1-214ENST00000512726 MAP7Q14244 749 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 TTLL4Q14679 1199 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 PRAMEF13Q5VWM6 474 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 NUTM2GQ5VZR2 741 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 CNNM4Q6P4Q7 775 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 NSMFQ6X4W1 530 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 LRRTM3Q86VH5 581 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 ATL2Q8NHH9 583 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 CCDC136Q96JN2 1154 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 MKRN2Q9H000 416 aaKnown RBP9.95□□□□□ -0.82
RFC1-214ENST00000512726 CYP4F12Q9HCS2 524 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 APEX2Q9UBZ4 518 aa9.95□□□□□ -0.82
RFC1-214ENST00000512726 H3BM21 787 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 CBFA2T2O43439 604 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 NID1P14543 1247 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 AMPD1P23109 780 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 SLBPQ14493 270 aaKnown RBP eCLIP9.94□□□□□ -0.82
RFC1-214ENST00000512726 ANKRD39Q53RE8 183 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 DCAF15Q66K64 600 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 BVESQ8NE79 360 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 TARS2Q9BW92 718 aaKnown RBP9.94□□□□□ -0.82
RFC1-214ENST00000512726 PIDD1Q9HB75 910 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 SSU72Q9NP77 194 aaKnown RBP9.94□□□□□ -0.82
RFC1-214ENST00000512726 SFMBT1Q9UHJ3 866 aa9.94□□□□□ -0.82
RFC1-214ENST00000512726 RNGTTO60942 597 aaKnown RBP9.93□□□□□ -0.82
RFC1-214ENST00000512726 VSIG8P0DPA2 414 aa9.93□□□□□ -0.82
RFC1-214ENST00000512726 DDX46Q7L014 1031 aaKnown RBP9.93□□□□□ -0.82
RFC1-214ENST00000512726 AHI1Q8N157 1196 aa9.93□□□□□ -0.82
RFC1-214ENST00000512726 PPM1KQ8N3J5 372 aa9.93□□□□□ -0.82
RFC1-214ENST00000512726 CRACR2BQ8N4Y2 399 aaPredicted RBP9.93□□□□□ -0.82
RFC1-214ENST00000512726 FOXQ1Q9C009 403 aa9.93□□□□□ -0.82
RFC1-214ENST00000512726 WHRNQ9P202 907 aa9.93□□□□□ -0.82
RFC1-214ENST00000512726 OIP5O43482 229 aa9.92□□□□□ -0.82
RFC1-214ENST00000512726 NEFMP07197 916 aa9.92□□□□□ -0.82
RFC1-214ENST00000512726 ADH5P11766 374 aa9.92□□□□□ -0.82
RFC1-214ENST00000512726 FAM50AQ14320 339 aaKnown RBP9.92□□□□□ -0.82
RFC1-214ENST00000512726 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
RFC1-214ENST00000512726 POMZP3Q6PJE2 187 aa9.92□□□□□ -0.82
RFC1-214ENST00000512726 ZNF513Q8N8E2 541 aaPredicted RBP9.92□□□□□ -0.82
RFC1-214ENST00000512726 ZNF512BQ96KM6 892 aaPredicted RBP9.92□□□□□ -0.82
RFC1-214ENST00000512726 IRX2Q9BZI1 471 aaPredicted RBP9.92□□□□□ -0.82
RFC1-214ENST00000512726 RNF208Q9H0X6 261 aa9.92□□□□□ -0.82
RFC1-214ENST00000512726 SUGCTQ9HAC7 445 aa9.92□□□□□ -0.82
RFC1-214ENST00000512726 EID1Q9Y6B2 187 aa9.92□□□□□ -0.82
RFC1-214ENST00000512726 ADAMTS2O95450 1211 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 SDSP20132 328 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 CD247P20963 164 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 RNF4P78317 190 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 SOX4Q06945 474 aaPredicted RBP9.91□□□□□ -0.82
RFC1-214ENST00000512726 DYMQ7RTS9 669 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 C7orf61Q8IZ16 206 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 AFAP1L2Q8N4X5 818 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 SMG8Q8ND04 991 aaKnown RBP9.91□□□□□ -0.82
RFC1-214ENST00000512726 DDX1Q92499 740 aaKnown RBP9.91□□□□□ -0.82
RFC1-214ENST00000512726 OSBP2Q969R2 916 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 ISL2Q96A47 359 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 RCC1LQ96I51 464 aaKnown RBP9.91□□□□□ -0.82
RFC1-214ENST00000512726 LRRC4BQ9NT99 713 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 AKT3Q9Y243 479 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 ZNF451Q9Y4E5 1061 aa9.91□□□□□ -0.82
RFC1-214ENST00000512726 ITGA4P13612 1032 aa9.9□□□□□ -0.82
RFC1-214ENST00000512726 GRIA2P42262 883 aa9.9□□□□□ -0.82
RFC1-214ENST00000512726 RAC1P63000 192 aa9.9□□□□□ -0.82
RFC1-214ENST00000512726 TRIM61Q5EBN2 209 aa9.9□□□□□ -0.82
RFC1-214ENST00000512726 NBPF12Q5TAG4 269 aaPredicted RBP9.9□□□□□ -0.82
RFC1-214ENST00000512726 UBE3DQ7Z6J8 389 aa9.9□□□□□ -0.82
RFC1-214ENST00000512726 FBXO11Q86XK2 927 aa9.9□□□□□ -0.82
RFC1-214ENST00000512726 MFSD2AQ8NA29 543 aa9.9□□□□□ -0.82
RFC1-214ENST00000512726 XAGE3Q8WTP9 111 aa9.9□□□□□ -0.82
RFC1-214ENST00000512726 THRAP3Q9Y2W1 955 aaKnown RBP9.9□□□□□ -0.82
RFC1-214ENST00000512726 DLL1O00548 723 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 EFCAB14O75071 495 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 CAPNS1P04632 268 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 ASPAP45381 313 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 GABREP78334 506 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 AUHQ13825 339 aaKnown RBP9.89□□□□□ -0.83
RFC1-214ENST00000512726 COL9A3Q14050 684 aaPredicted RBP9.89□□□□□ -0.83
RFC1-214ENST00000512726 ACAD11Q709F0 780 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 TRIM59Q8IWR1 403 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.89□□□□□ -0.83
RFC1-214ENST00000512726 RIN3Q8TB24 985 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 MRGPRX3Q96LB0 322 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 LGR4Q9BXB1 951 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 SLC52A1Q9NWF4 448 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 NDOR1Q9UHB4 597 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 EMC9Q9Y3B6 208 aa9.89□□□□□ -0.83
RFC1-214ENST00000512726 LRIG2O94898 1065 aa9.88□□□□□ -0.83
RFC1-214ENST00000512726 WISP1O95388 367 aa9.88□□□□□ -0.83
RFC1-214ENST00000512726 BCRP11274 1271 aa9.88□□□□□ -0.83
RFC1-214ENST00000512726 GUCY2FP51841 1108 aa9.88□□□□□ -0.83
RFC1-214ENST00000512726 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
RFC1-214ENST00000512726 SMYD4Q8IYR2 804 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms