RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 GKAP1Q5VSY0 366 aaPredicted RBP6.4□□□□□ -1.38
USP38-203ENST00000511739 PPP4R4Q6NUP7 873 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 TTLL7Q6ZT98 887 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 PDZD4Q76G19 769 aaPredicted RBP6.4□□□□□ -1.38
USP38-203ENST00000511739 CEP120Q8N960 986 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 LINS1Q8NG48 757 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 SEPT10Q9P0V9 454 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 ZSCAN22P10073 491 aaPredicted RBP6.4□□□□□ -1.38
USP38-203ENST00000511739 PALM2Q8IXS6 379 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 BBS5Q8N3I7 341 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 TSPYL6Q8N831 410 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 GCNAQ96QF7 691 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 NUCKS1Q9H1E3 243 aaKnown RBP6.4□□□□□ -1.38
USP38-203ENST00000511739 SLC8A2Q9UPR5 921 aa6.4□□□□□ -1.38
USP38-203ENST00000511739 PPRC1Q5VV67 1664 aaKnown RBP6.4□□□□□ -1.39
USP38-203ENST00000511739 KRT10P13645 584 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 SYT1P21579 422 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 ADCY7P51828 1080 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 ASIC2Q16515 512 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 GIMAP6Q6P9H5 292 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 TBC1D22AQ8WUA7 517 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 ATP2A3Q93084 1043 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 HESX1Q9UBX0 185 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 BAG5Q9UL15 447 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 NCKAP5LQ9HCH0 1330 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 TNNC2P02585 160 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 GCP02774 474 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 CEP85LQ5SZL2 805 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 SCYL2Q6P3W7 929 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 CTTNBP2NLQ9P2B4 639 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 PA2G4Q9UQ80 394 aaKnown RBP6.4□□□□□ -1.39
USP38-203ENST00000511739 AGLP35573 1532 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 IQGAP1P46940 1657 aa6.4□□□□□ -1.39
USP38-203ENST00000511739 A2ML1A8K2U0 1454 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 ALAS1P13196 640 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 NMIQ13287 307 aaPredicted RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 KRT81Q14533 505 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 GPATCH11Q8N954 259 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 TRIM56Q9BRZ2 755 aaKnown RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 ASIC3Q9UHC3 531 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 PAXBP1Q9Y5B6 917 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 ABCC4O15439 1325 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 GCNT3O95395 438 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 BCRP11274 1271 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 SDSP20132 328 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 ELF1P32519 619 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 KCTD2Q14681 263 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 PUM3Q15397 648 aaKnown RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 ANO6Q4KMQ2 910 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 SKAP1Q86WV1 359 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 CCDC24Q8N4L8 307 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 ZFP91Q96JP5 570 aaPredicted RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 AATFQ9NY61 560 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP38-203ENST00000511739 ANAPC5Q9UJX4 755 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 I3L4J1 428 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 GSTA1P08263 222 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 GSTA2P09210 222 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 IGBP1P78318 339 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 LACTBP83111 547 aaPredicted RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 TBC1D8BQ0IIM8 1120 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 APOBRQ0VD83 1088 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 TFCP2Q12800 502 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 KRT33BQ14525 404 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 HERC4Q5GLZ8 1057 aaPredicted RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 TMCO4Q5TGY1 634 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 RSRC2Q7L4I2 434 aaKnown RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 GBP7Q8N8V2 638 aaPredicted RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 SNX29Q8TEQ0 813 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 PPP4R1Q8TF05 950 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 SUGCTQ9HAC7 445 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 DLC1Q96QB1 1528 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 XPOTO43592 962 aaKnown RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 SKILP12757 684 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 ITGA6P23229 1130 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 MIER3Q7Z3K6 550 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 POMGNT1Q8WZA1 660 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 FAM89AQ96GI7 184 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 VCXQ9H320 206 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 KIDINS220Q9ULH0 1771 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 NRXN1Q9ULB1 1477 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 SORBS3O60504 671 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 PDE8AO60658 829 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 S100BP04271 92 aaPredicted RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 OSBPP22059 807 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 PTPREP23469 700 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 PIK3AP1Q6ZUJ8 805 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 ARMC9Q7Z3E5 817 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 APOL6Q9BWW8 343 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 MRPL44Q9H9J2 332 aaKnown RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 USP40Q9NVE5 1235 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 IPO11Q9UI26 975 aaKnown RBP6.39□□□□□ -1.39
USP38-203ENST00000511739 DEPDC5O75140 1603 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 METP08581 1390 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 ALKQ9UM73 1620 aa6.39□□□□□ -1.39
USP38-203ENST00000511739 GAS7O60861 476 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 KRT3P12035 628 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 UVSSAQ2YD98 709 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 METTL23Q86XA0 190 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 C2CD5Q86YS7 1000 aa6.38□□□□□ -1.39
USP38-203ENST00000511739 IWS1Q96ST2 819 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms