RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 GTF3C3Q9Y5Q9 886 aa5.89□□□□□ -1.47
SCAMP1-204ENST00000511551 ATP2B2Q01814 1243 aa5.88□□□□□ -1.47
SCAMP1-204ENST00000511551 ASB16Q96NS5 453 aa5.88□□□□□ -1.47
SCAMP1-204ENST00000511551 SGPP1Q9BX95 441 aa5.88□□□□□ -1.47
SCAMP1-204ENST00000511551 XYLT2Q9H1B5 865 aa5.88□□□□□ -1.47
SCAMP1-204ENST00000511551 RBM47A0AV96 593 aaKnown RBP5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 NOTOA8MTQ0 251 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 HRKO00198 91 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 RFXAPO00287 272 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 LMNB1P20700 586 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 LTKP29376 864 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 PDE6BP35913 854 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 TEKQ02763 1124 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 DUSP4Q13115 394 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 SSPNQ14714 243 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 CCDC85BQ15834 202 aaPredicted RBP5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 TSNAXIP1Q2TAA8 658 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 ANKS4BQ8N8V4 417 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 CYB5D2Q8WUJ1 264 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 RNF141Q8WVD5 230 aa5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 SYTL4Q96C24 671 aaPredicted RBP5.87□□□□□ -1.47
SCAMP1-204ENST00000511551 PSPNO60542 156 aa5.86□□□□□ -1.47
SCAMP1-204ENST00000511551 RPL6Q02878 288 aaKnown RBP5.86□□□□□ -1.47
SCAMP1-204ENST00000511551 G6PC3Q9BUM1 346 aa5.86□□□□□ -1.47
SCAMP1-204ENST00000511551 MIR1-1HGQ9H1L0 117 aa5.86□□□□□ -1.47
SCAMP1-204ENST00000511551 GPR160Q9UJ42 338 aa5.86□□□□□ -1.47
SCAMP1-204ENST00000511551 OR14I1A6ND48 311 aa5.85□□□□□ -1.47
SCAMP1-204ENST00000511551 LRRN2O75325 713 aa5.85□□□□□ -1.47
SCAMP1-204ENST00000511551 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
SCAMP1-204ENST00000511551 TMEM201Q5SNT2 666 aa5.85□□□□□ -1.47
SCAMP1-204ENST00000511551 DACT3Q96B18 629 aaPredicted RBP5.85□□□□□ -1.47
SCAMP1-204ENST00000511551 SIGLEC10Q96LC7 697 aa5.85□□□□□ -1.47
SCAMP1-204ENST00000511551 MBD1Q9UIS9 605 aaPredicted RBP5.85□□□□□ -1.47
SCAMP1-204ENST00000511551 UPK3BL1B0FP48 263 aa5.84□□□□□ -1.47
SCAMP1-204ENST00000511551 UPK3BL2E5RIL1 263 aa5.84□□□□□ -1.47
SCAMP1-204ENST00000511551 TFE3P19532 575 aaPredicted RBP5.84□□□□□ -1.47
SCAMP1-204ENST00000511551 LIG3P49916 1009 aa5.84□□□□□ -1.47
SCAMP1-204ENST00000511551 SKOR2Q2VWA4 1001 aaPredicted RBP5.84□□□□□ -1.47
SCAMP1-204ENST00000511551 NLRX1Q86UT6 975 aa5.84□□□□□ -1.47
SCAMP1-204ENST00000511551 SASH1O94885 1247 aa5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 BRD1O95696 1058 aa5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 EIF4BP23588 611 aaKnown RBP5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 GNA15P30679 374 aa5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 YARSP54577 528 aaKnown RBP5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 SLFN12Q8IYM2 578 aa5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 PANK1Q8TE04 598 aa5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 CRTAC1Q9NQ79 661 aa5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 IRAK3Q9Y616 596 aa5.83□□□□□ -1.48
SCAMP1-204ENST00000511551 OTOL1A6NHN0 477 aaPredicted RBP5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 EFEMP2O95967 443 aa5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 LDHBP07195 334 aaKnown RBP5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 P4HBP07237 508 aaKnown RBP5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 PI3P19957 117 aa5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 CCDC84Q86UT8 332 aaPredicted RBP5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 FAM13CQ8NE31 585 aa5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 ENOX1Q8TC92 643 aaKnown RBP5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 CORINQ9Y5Q5 1042 aa5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 AK5Q9Y6K8 562 aa5.82□□□□□ -1.48
SCAMP1-204ENST00000511551 PRR36Q9H6K5 1346 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 SHISA3A0PJX4 238 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 RLBP1P12271 317 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 PLCG1P19174 1290 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 GALK1P51570 392 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 SRSF3P84103 164 aaKnown RBP5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 NFKB2Q00653 900 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 GGNQ86UU5 652 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 VWCEQ96DN2 955 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 KREMEN1Q96MU8 473 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 ASPNQ9BXN1 380 aa5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 EPB41L4AQ9HCS5 686 aaPredicted RBP5.81□□□□□ -1.48
SCAMP1-204ENST00000511551 SLC22A31A6NKX4 558 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 N4BP3O15049 544 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 NRDCO43847 1150 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 KIR2DL1P43626 348 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 KIR2DL2P43627 348 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 AFF3P51826 1226 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 YBX1P67809 324 aaKnown RBP5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 MAP3K11Q16584 847 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 ADGRF1Q5T601 910 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 RNF111Q6ZNA4 994 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 PRRT2Q7Z6L0 340 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 USHBP1Q8N6Y0 703 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 JARID2Q92833 1246 aaPredicted RBP5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 CNTD2Q9H8S5 307 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 SIRT5Q9NXA8 310 aa5.8□□□□□ -1.48
SCAMP1-204ENST00000511551 IRS4O14654 1257 aaPredicted RBP5.79□□□□□ -1.48
SCAMP1-204ENST00000511551 CILPO75339 1184 aa5.79□□□□□ -1.48
SCAMP1-204ENST00000511551 CELA3BP08861 270 aa5.79□□□□□ -1.48
SCAMP1-204ENST00000511551 VIPR1P32241 457 aa5.79□□□□□ -1.48
SCAMP1-204ENST00000511551 EPHB3P54753 998 aa5.79□□□□□ -1.48
SCAMP1-204ENST00000511551 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
SCAMP1-204ENST00000511551 SIRT2Q8IXJ6 389 aa5.79□□□□□ -1.48
SCAMP1-204ENST00000511551 FAM221AA4D161 298 aa5.78□□□□□ -1.48
SCAMP1-204ENST00000511551 PNLIPP16233 465 aa5.78□□□□□ -1.48
SCAMP1-204ENST00000511551 CLEC16AQ2KHT3 1053 aa5.78□□□□□ -1.48
SCAMP1-204ENST00000511551 TMEFF1Q8IYR6 380 aa5.78□□□□□ -1.48
SCAMP1-204ENST00000511551 SYTL5Q8TDW5 730 aaPredicted RBP5.78□□□□□ -1.48
SCAMP1-204ENST00000511551 CCDC74BQ96LY2 380 aa5.78□□□□□ -1.48
SCAMP1-204ENST00000511551 NOC4LQ9BVI4 516 aaKnown RBP5.78□□□□□ -1.48
SCAMP1-204ENST00000511551 TLR6Q9Y2C9 796 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms