RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	CALM2	P0DP24	149 aa		13.99	□□□□□ -0.17
RACK1-223	ENST00000510199	CALM3	P0DP25	149 aa		13.99	□□□□□ -0.17
RACK1-223	ENST00000510199	PDIA3	P30101	505 aa	Known RBP	13.99	□□□□□ -0.17
RACK1-223	ENST00000510199	TROAP	Q12815	778 aa		13.99	□□□□□ -0.17
RACK1-223	ENST00000510199	ZNF280C	Q8ND82	737 aa		13.99	□□□□□ -0.17
RACK1-223	ENST00000510199	ACER1	Q8TDN7	264 aa		13.99	□□□□□ -0.17
RACK1-223	ENST00000510199	MAP3K14	Q99558	947 aa		13.99	□□□□□ -0.17
RACK1-223	ENST00000510199	NID2	Q14112	1375 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199		A0A1W2PRG0	241 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	SPDYE5	A6NIY4	337 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	GOLGA8B	A8MQT2	603 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	ECE1	P42892	770 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	PPAT	Q06203	517 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	BECN1	Q14457	450 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	PPP2R5B	Q15173	497 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	ME3	Q16798	604 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	CCDC84	Q86UT8	332 aa	Predicted RBP	13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	ERO1B	Q86YB8	467 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	LRRC47	Q8N1G4	583 aa	Known RBP	13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	GMCL1P1	Q8NEA9	526 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	TMX3	Q96JJ7	454 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	CLMN	Q96JQ2	1002 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	ELP3	Q9H9T3	547 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	AFG3L2	Q9Y4W6	797 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	ZHX2	Q9Y6X8	837 aa		13.98	□□□□□ -0.17
RACK1-223	ENST00000510199	USP17L10	C9JJH3	530 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199		F5H6K3	240 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	PFKFB2	O60825	505 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	LARGE1	O95461	756 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	METAP2	P50579	478 aa	Known RBP eCLIP	13.97	□□□□□ -0.17	2e-10	■■■□□ 18.3
RACK1-223	ENST00000510199	KLRC3	Q07444	240 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	SPP2	Q13103	211 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	MICU3	Q86XE3	530 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	NUP133	Q8WUM0	1156 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	CHMP4C	Q96CF2	233 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	SLC10A4	Q96EP9	437 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	FEZ1	Q99689	392 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	MYL10	Q9BUA6	226 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	KIAA1683	Q9H0B3	1180 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	SLK	Q9H2G2	1235 aa	Predicted RBP	13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	GOPC	Q9HD26	462 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	HPS5	Q9UPZ3	1129 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	RLF	Q13129	1914 aa		13.97	□□□□□ -0.17
RACK1-223	ENST00000510199	GOLGA8A	A7E2F4	631 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	C19orf81	C9J6K1	198 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	SNHG28	P0DPA3	235 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	KIF5B	P33176	963 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	USP14	P54578	494 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	BACE1	P56817	501 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	HUNK	P57058	714 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	STK3	Q13188	491 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	PPIL2	Q13356	520 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	GRM4	Q14833	912 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	SLFN13	Q68D06	897 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	FANCB	Q8NB91	859 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	CTCFL	Q8NI51	663 aa	Predicted RBP	13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	DCAF4	Q8WV16	495 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	GTF3C6	Q969F1	213 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	OPTN	Q96CV9	577 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	VCPKMT	Q9H867	229 aa		13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	COL11A1	P12107	1806 aa	Predicted RBP	13.96	□□□□□ -0.17
RACK1-223	ENST00000510199	CCDC196	A0A1B0GTZ2	297 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	TMEM88B	A6NKF7	163 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	CXCL11	O14625	94 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	NDUFB10	O96000	172 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	PDHB	P11177	359 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	RXRA	P19793	462 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	CCT2	P78371	535 aa	Known RBP	13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	SCRN1	Q12765	414 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	MTMR2	Q13614	643 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	RTN1	Q16799	776 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	ASPRV1	Q53RT3	343 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	SH3D19	Q5HYK7	790 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	USP17L2	Q6R6M4	530 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	SAPCD2	Q86UD0	394 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	RAB11FIP4	Q86YS3	637 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	CNKSR2	Q8WXI2	1034 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	LPAR1	Q92633	364 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	OTUD5	Q96G74	571 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	GMCL1	Q96IK5	515 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	RBM28	Q9NW13	759 aa	Known RBP	13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	TLL2	Q9Y6L7	1015 aa		13.95	□□□□□ -0.18
RACK1-223	ENST00000510199	PALM3	A6NDB9	673 aa	Predicted RBP	13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	TRIM75P	A6NK02	468 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	IRF6	O14896	467 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	DHX16	O60231	1041 aa	Known RBP	13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	PARP1	P09874	1014 aa	Known RBP	13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	CUL4A	Q13619	759 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	ZYX	Q15942	572 aa	Known RBP	13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	GPATCH4	Q5T3I0	446 aa	Known RBP	13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	CCDC144CP	Q8IYA2	1237 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	NECAB1	Q8N987	351 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	WNK4	Q96J92	1243 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	C12orf42	Q96LP6	360 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	MAD2L2	Q9UI95	211 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	KCNH4	Q9UQ05	1017 aa		13.94	□□□□□ -0.18
RACK1-223	ENST00000510199	MTMR7	Q9Y216	660 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms