RNA–Protein interactions for RNA: ENST00000509856.1

FAM90A4P-201, Transcript of family with sequence similarity 90 member A4, pseudogene, humanhuman

BASIC

Gene FAM90A4P, Length 1,395 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A4P-201ENST00000509856 TROAPQ12815 778 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 STK3Q13188 491 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 CPLX2Q6PUV4 134 aaKnown RBP13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 CLEC10AQ8IUN9 316 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 GMCL1P1Q8NEA9 526 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 NUP133Q8WUM0 1156 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 GTF3C6Q969F1 213 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 IPO9Q96P70 1041 aaKnown RBP13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 FEZ1Q99689 392 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 GOPCQ9HD26 462 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 RBM28Q9NW13 759 aaKnown RBP13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 FZD1Q9UP38 647 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 TMX2Q9Y320 296 aa13.9□□□□□ -0.18
FAM90A4P-201ENST00000509856 DOCK1Q14185 1865 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 CPLX1O14810 134 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 GNAQP50148 359 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 FSTL1Q12841 308 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 CUL4AQ13619 759 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 RTN1Q16799 776 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 LDLRAD1Q5T700 205 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 ERO1BQ86YB8 467 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 SIAH1Q8IUQ4 282 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 LRRC47Q8N1G4 583 aaKnown RBP13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 FANCBQ8NB91 859 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 INTS4Q96HW7 963 aaKnown RBP13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 HPS5Q9UPZ3 1129 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 SNCAIPQ9Y6H5 919 aa13.89□□□□□ -0.19
FAM90A4P-201ENST00000509856 UBE2Q2LH0YL09 131 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 CDKL5O76039 1030 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 LARGE1O95461 756 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 USP14P54578 494 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 DCAF4Q8WV16 495 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 LZTS2Q9BRK4 669 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 LLPHQ9BRT6 129 aaKnown RBP13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 KIAA1683Q9H0B3 1180 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 ZHX2Q9Y6X8 837 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 PASKQ96RG2 1323 aa13.88□□□□□ -0.19
FAM90A4P-201ENST00000509856 A0A1W2PRG0 241 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 SPDYE5A6NIY4 337 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 C19orf81C9J6K1 198 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 F5H6K3 240 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 PARP1P09874 1014 aaKnown RBP13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 SNHG28P0DPA3 235 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 PDHBP11177 359 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 PPATQ06203 517 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 KLRC3Q07444 240 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 SCRN1Q12765 414 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 GRM4Q14833 912 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 ASPRV1Q53RT3 343 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 GPATCH4Q5T3I0 446 aaKnown RBP13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 SLFN13Q68D06 897 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 MOB2Q70IA6 237 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 CCDC83Q8IWF9 413 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 NECAB1Q8N987 351 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 LPAR1Q92633 364 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 SLC10A4Q96EP9 437 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 GMCL1Q96IK5 515 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 VCPKMTQ9H867 229 aa13.87□□□□□ -0.19
FAM90A4P-201ENST00000509856 ATAD5Q96QE3 1844 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 RAD21O60216 631 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 RXRAP19793 462 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 ECE1P42892 770 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 SLC1A4P43007 532 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 FMR1Q06787 632 aaKnown RBP eCLIP13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 SPP2Q13103 211 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 USP17L2Q6R6M4 530 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 RAB11FIP4Q86YS3 637 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 CCDC144CPQ8IYA2 1237 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 ELP3Q9H9T3 547 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 NCOA5Q9HCD5 579 aaKnown RBP13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 MTMR7Q9Y216 660 aa13.86□□□□□ -0.19
FAM90A4P-201ENST00000509856 PALM3A6NDB9 673 aaPredicted RBP13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 TRIM75PA6NK02 468 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 NDUFB10O96000 172 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 BACE1P56817 501 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 HMGN5P82970 282 aaKnown RBP13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 PPIL2Q13356 520 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 CCDC96Q2M329 555 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 CST9Q5W186 159 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 CCDC84Q86UT8 332 aaPredicted RBP13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 CLMNQ96JQ2 1002 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 KIF3AQ9Y496 699 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 AFG3L2Q9Y4W6 797 aa13.85□□□□□ -0.19
FAM90A4P-201ENST00000509856 CXCL11O14625 94 aa13.84□□□□□ -0.19
FAM90A4P-201ENST00000509856 BMP3P12645 472 aa13.84□□□□□ -0.19
FAM90A4P-201ENST00000509856 IFNAR1P17181 557 aa13.84□□□□□ -0.19
FAM90A4P-201ENST00000509856 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
FAM90A4P-201ENST00000509856 CDC27P30260 824 aa13.84□□□□□ -0.19
FAM90A4P-201ENST00000509856 ADD1P35611 737 aaKnown RBP13.84□□□□□ -0.19
FAM90A4P-201ENST00000509856 MTMR2Q13614 643 aa13.84□□□□□ -0.19
FAM90A4P-201ENST00000509856 TMTC3Q6ZXV5 915 aa13.84□□□□□ -0.19
FAM90A4P-201ENST00000509856 TRIM22Q8IYM9 498 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms