RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 LBX2Q6XYB7 198 aa19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 NEDD1Q8NHV4 660 aa19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 MKL1Q969V6 931 aa19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 ZNF333Q96JL9 665 aa19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 NYAP2Q9P242 653 aa19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 ANAPC4Q9UJX5 808 aa19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 RABGAP1Q9Y3P9 1069 aa19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 KIAA0100Q14667 2235 aaKnown RBP19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 MYPNQ86TC9 1320 aa19.22■□□□□ 0.67
PDLIM5-212ENST00000509333 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 ATP2B2Q01814 1243 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 CTDSPL2Q05D32 466 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 PDE4BQ07343 736 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 SLC9C1Q4G0N8 1177 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 TTC22Q5TAA0 569 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 RAET1EQ8TD07 263 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 SH3TC2Q8TF17 1288 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 GTF3C2Q8WUA4 911 aaPredicted RBP19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 LPAR1Q92633 364 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 COA7Q96BR5 231 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 SH2D4AQ9H788 454 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
PDLIM5-212ENST00000509333 HTTP42858 3142 aa19.2■□□□□ 0.66
PDLIM5-212ENST00000509333 ERVK-9P63128 1117 aa19.2■□□□□ 0.66
PDLIM5-212ENST00000509333 ERVK-24P63145 666 aa19.2■□□□□ 0.66
PDLIM5-212ENST00000509333 TFAP4Q01664 338 aa19.2■□□□□ 0.66
PDLIM5-212ENST00000509333 IRF5Q13568 498 aa19.2■□□□□ 0.66
PDLIM5-212ENST00000509333 CWC27Q6UX04 472 aaKnown RBP19.2■□□□□ 0.66
PDLIM5-212ENST00000509333 SPICE1Q8N0Z3 855 aa19.2■□□□□ 0.66
PDLIM5-212ENST00000509333 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
PDLIM5-212ENST00000509333 HIP1O00291 1037 aa19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 GSPT1P15170 499 aaKnown RBP19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 GRK4P32298 578 aa19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 DSG3P32926 999 aa19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 FAM47AQ5JRC9 791 aa19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 MTMR4Q9NYA4 1195 aa19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 BTBD7Q9P203 1132 aa19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 CLIP2Q9UDT6 1046 aa19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 CCDC171Q6TFL3 1326 aa19.19■□□□□ 0.66
PDLIM5-212ENST00000509333 POTEFA5A3E0 1075 aa19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 F5H6K3 240 aa19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 ADCY3O60266 1144 aa19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 KLRC3Q07444 240 aa19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 PXYLP1Q8TE99 480 aa19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 PAGR1Q9BTK6 254 aa19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 PORCNQ9H237 461 aa19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 ADAMTS5Q9UNA0 930 aa19.18■□□□□ 0.66
PDLIM5-212ENST00000509333 WDR46O15213 610 aaKnown RBP19.17■□□□□ 0.66
PDLIM5-212ENST00000509333 MFAP1P55081 439 aaKnown RBP19.17■□□□□ 0.66
PDLIM5-212ENST00000509333 CEP95Q96GE4 821 aa19.17■□□□□ 0.66
PDLIM5-212ENST00000509333 IL17RBQ9NRM6 502 aa19.17■□□□□ 0.66
PDLIM5-212ENST00000509333 DIAPH3Q9NSV4 1193 aa19.17■□□□□ 0.66
PDLIM5-212ENST00000509333 ORC4O43929 436 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 TSPY3P0CV98 308 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 TSPY8P0CW00 308 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 MAPK4P31152 587 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 MLLT1Q03111 559 aaPredicted RBP19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 MTFR1Q15390 333 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 USP6NLQ92738 828 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 TMEM106CQ9BVX2 250 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 TANGO6Q9C0B7 1094 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 GOPCQ9HD26 462 aa19.16■□□□□ 0.66
PDLIM5-212ENST00000509333 CENPFP49454 3210 aa19.15■□□□□ 0.66
PDLIM5-212ENST00000509333 TTLL1O95922 423 aa19.15■□□□□ 0.66
PDLIM5-212ENST00000509333 SLAIN1Q8ND83 568 aa19.15■□□□□ 0.66
PDLIM5-212ENST00000509333 MGAMO43451 1857 aa19.15■□□□□ 0.66
PDLIM5-212ENST00000509333 MYH8P13535 1937 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 FLOT1O75955 427 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 MYCP01106 439 aaPredicted RBP19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 ELNP15502 786 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 EN2P19622 333 aaPredicted RBP19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 NOVP48745 357 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 CCNA1P78396 465 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 MORN1Q5T089 497 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 PLEKHH3Q7Z736 793 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 IL25Q9H293 177 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 FBXO28Q9NVF7 368 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 SYNPO2Q9UMS6 1093 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 ZMYM6O95789 1325 aa19.14■□□□□ 0.65
PDLIM5-212ENST00000509333 RANBP6O60518 1105 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 NDUFB10O96000 172 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 CHMLP26374 656 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 HAND2P61296 217 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 FAM83BQ5T0W9 1011 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 GPR142Q7Z601 462 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 MB21D1Q8N884 522 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 ATG4CQ96DT6 458 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 NUP88Q99567 741 aaPredicted RBP19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 NUDT12Q9BQG2 462 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 MOV10L1Q9BXT6 1211 aaKnown RBP19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 NBPF3Q9H094 633 aa19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 BIN2Q9UBW5 565 aaPredicted RBP19.13■□□□□ 0.65
PDLIM5-212ENST00000509333 TSPY2A6NKD2 308 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 RAD21O60216 631 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 NMT2O60551 498 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 XRCC5P13010 732 aaKnown RBP19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 CYP2B6P20813 491 aa19.12■□□□□ 0.65
PDLIM5-212ENST00000509333 AKNAD1Q5T1N1 836 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms