RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 LRRC41Q15345 812 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 CERKLQ49MI3 558 aaPredicted RBP12.47□□□□□ -0.41
COPS4-207ENST00000509317 CLEC10AQ8IUN9 316 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 MAGEB6Q8N7X4 407 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 LENG1Q96BZ8 264 aaPredicted RBP12.47□□□□□ -0.41
COPS4-207ENST00000509317 CCDC8Q9H0W5 538 aaPredicted RBP12.47□□□□□ -0.41
COPS4-207ENST00000509317 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 C1orf115Q9H7X2 142 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 GINM1Q9NU53 330 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 SERPINB13Q9UIV8 391 aa12.47□□□□□ -0.41
COPS4-207ENST00000509317 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
COPS4-207ENST00000509317 BCAR3O75815 825 aa12.46□□□□□ -0.41
COPS4-207ENST00000509317 TRIM27P14373 513 aa12.46□□□□□ -0.41
COPS4-207ENST00000509317 ERCC3P19447 782 aa12.46□□□□□ -0.41
COPS4-207ENST00000509317 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.41
COPS4-207ENST00000509317 GRIN2CQ14957 1233 aa12.46□□□□□ -0.41
COPS4-207ENST00000509317 CCDC158Q5M9N0 1113 aa12.46□□□□□ -0.41
COPS4-207ENST00000509317 LBX2Q6XYB7 198 aa12.46□□□□□ -0.41
COPS4-207ENST00000509317 ARRDC4Q8NCT1 418 aa12.46□□□□□ -0.41
COPS4-207ENST00000509317 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
COPS4-207ENST00000509317 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
COPS4-207ENST00000509317 MYO5AQ9Y4I1 1855 aaKnown RBP12.46□□□□□ -0.42
COPS4-207ENST00000509317 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
COPS4-207ENST00000509317 MPHOSPH10O00566 681 aaKnown RBP12.45□□□□□ -0.42
COPS4-207ENST00000509317 SEPT4O43236 478 aa12.45□□□□□ -0.42
COPS4-207ENST00000509317 PGK1P00558 417 aa12.45□□□□□ -0.42
COPS4-207ENST00000509317 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
COPS4-207ENST00000509317 USP14P54578 494 aa12.45□□□□□ -0.42
COPS4-207ENST00000509317 SMAD3P84022 425 aaKnown RBP12.45□□□□□ -0.42
COPS4-207ENST00000509317 PLS1Q14651 629 aa12.45□□□□□ -0.42
COPS4-207ENST00000509317 SNX17Q15036 470 aa12.45□□□□□ -0.42
COPS4-207ENST00000509317 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
COPS4-207ENST00000509317 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
COPS4-207ENST00000509317 SPATC1LQ9H0A9 340 aa12.45□□□□□ -0.42
COPS4-207ENST00000509317 FOCADQ5VW36 1801 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 SMIM22K7EJ46 135 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 PQBP1O60828 265 aaKnown RBP12.44□□□□□ -0.42
COPS4-207ENST00000509317 SURF6O75683 361 aaKnown RBP12.44□□□□□ -0.42
COPS4-207ENST00000509317 CYP2D6P10635 497 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 POLA2Q14181 598 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 OLFML2BQ68BL8 750 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 NCAPG2Q86XI2 1143 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 SPICE1Q8N0Z3 855 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 SLC44A5Q8NCS7 719 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 EHD4Q9H223 541 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 RLFQ13129 1914 aa12.44□□□□□ -0.42
COPS4-207ENST00000509317 PGK2P07205 417 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 CT47B1P0C2W7 299 aaPredicted RBP12.43□□□□□ -0.42
COPS4-207ENST00000509317 COG2Q14746 738 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 TMEM57Q8N5G2 664 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 PPM1EQ8WY54 764 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 ARHGAP45Q92619 1136 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 EAF2Q96CJ1 260 aaPredicted RBP12.43□□□□□ -0.42
COPS4-207ENST00000509317 MAML3Q96JK9 1138 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 CABP5Q9NP86 173 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 GPR108Q9NPR9 543 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 CHD9Q3L8U1 2897 aa12.43□□□□□ -0.42
COPS4-207ENST00000509317 POLR3DP05423 398 aaPredicted RBP12.42□□□□□ -0.42
COPS4-207ENST00000509317 COL9A1P20849 921 aa12.42□□□□□ -0.42
COPS4-207ENST00000509317 IRX5P78411 483 aaPredicted RBP12.42□□□□□ -0.42
COPS4-207ENST00000509317 TTC6Q86TZ1 520 aa12.42□□□□□ -0.42
COPS4-207ENST00000509317 DYNLL2Q96FJ2 89 aa12.42□□□□□ -0.42
COPS4-207ENST00000509317 RIOK1Q9BRS2 568 aaKnown RBP12.42□□□□□ -0.42
COPS4-207ENST00000509317 XPNPEP3Q9NQH7 507 aa12.42□□□□□ -0.42
COPS4-207ENST00000509317 GRXCR1A8MXD5 290 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 FLOT1O75955 427 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 CLTBP09497 229 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 DNAJB2P25686 324 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 PBX2P40425 430 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 GABPAQ06546 454 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 SIAH1Q8IUQ4 282 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 SSH3Q8TE77 659 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 SDR42E1Q8WUS8 393 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 ZNF512BQ96KM6 892 aaPredicted RBP12.41□□□□□ -0.42
COPS4-207ENST00000509317 FBXO28Q9NVF7 368 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 HOXC10Q9NYD6 342 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 PHF24Q9UPV7 400 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 MYH1P12882 1939 aa12.41□□□□□ -0.42
COPS4-207ENST00000509317 A0A1W2PQ45 241 aaPredicted RBP12.4□□□□□ -0.42
COPS4-207ENST00000509317 A0A1W2PQY0 241 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 STRNO43815 780 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 RAG1P15918 1043 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 DSG3P32926 999 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 TMEM132BQ14DG7 1078 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 SHCBP1Q8NEM2 672 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 TMEM39AQ9NV64 488 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 MCM9Q9NXL9 1143 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 TACC3Q9Y6A5 838 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 XIRP2A4UGR9 3374 aa12.4□□□□□ -0.42
COPS4-207ENST00000509317 CYP2D7A0A087X1C5 515 aa12.39□□□□□ -0.43
COPS4-207ENST00000509317 MYADML2A6NDP7 307 aa12.39□□□□□ -0.43
COPS4-207ENST00000509317 KIAA0355O15063 1070 aa12.39□□□□□ -0.43
COPS4-207ENST00000509317 RARBP10826 455 aa12.39□□□□□ -0.43
COPS4-207ENST00000509317 FCER1AP12319 257 aa12.39□□□□□ -0.43
COPS4-207ENST00000509317 AKR1B1P15121 316 aa12.39□□□□□ -0.43
COPS4-207ENST00000509317 ATP8B2P98198 1209 aa12.39□□□□□ -0.43
COPS4-207ENST00000509317 FPGSQ05932 587 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms