RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 EEF2P13639 858 aaKnown RBP10.36□□□□□ -0.75
SNCA-211ENST00000508895 IRX3P78415 501 aaPredicted RBP10.36□□□□□ -0.75
SNCA-211ENST00000508895 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 KIF22Q14807 665 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 SLC9C1Q4G0N8 1177 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 TMEM179Q6ZVK1 233 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 NUP88Q99567 741 aaPredicted RBP10.36□□□□□ -0.75
SNCA-211ENST00000508895 FEZ1Q99689 392 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 CABP5Q9NP86 173 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 FBXO28Q9NVF7 368 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 SWAP70Q9UH65 585 aa10.36□□□□□ -0.75
SNCA-211ENST00000508895 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 TNPO2O14787 897 aaKnown RBP10.35□□□□□ -0.75
SNCA-211ENST00000508895 ADCY3O60266 1144 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 SDSP20132 328 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 GRK4P32298 578 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 ERVK-24P63145 666 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 ICA1Q05084 483 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 CCL14Q16627 93 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 USP6NLQ92738 828 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 RILPL2Q969X0 211 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 CHMP4CQ96CF2 233 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 ARPP21Q9UBL0 812 aaPredicted RBP10.35□□□□□ -0.75
SNCA-211ENST00000508895 PNMA3Q9UL41 463 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.35□□□□□ -0.75
SNCA-211ENST00000508895 TMX2Q9Y320 296 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 MYH6P13533 1939 aa10.35□□□□□ -0.75
SNCA-211ENST00000508895 NMT2O60551 498 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 APPP05067 770 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 CCL5P13501 91 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 GCLCP48506 637 aaPredicted RBP10.34□□□□□ -0.75
SNCA-211ENST00000508895 TDO2P48775 406 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 ATP2B2Q01814 1243 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 PPARAQ07869 468 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 GIMAP6Q6P9H5 292 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 RAET1EQ8TD07 263 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 TRIB2Q92519 343 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 ATG4CQ96DT6 458 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 VCPKMTQ9H867 229 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 FLRT1Q9NZU1 646 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
SNCA-211ENST00000508895 GNRH1P01148 92 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 INHAP05111 366 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 CYP2B6P20813 491 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 FXR1P51114 621 aaKnown RBP eCLIP10.33□□□□□ -0.76
SNCA-211ENST00000508895 USP14P54578 494 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 PABPC4Q13310 644 aaKnown RBP eCLIP10.33□□□□□ -0.76
SNCA-211ENST00000508895 LRRFIP1Q32MZ4 808 aaKnown RBP10.33□□□□□ -0.76
SNCA-211ENST00000508895 BMP2KLQ5H9B9 411 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 FAM83BQ5T0W9 1011 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 SAMD1Q6SPF0 538 aaPredicted RBP10.33□□□□□ -0.76
SNCA-211ENST00000508895 GPR142Q7Z601 462 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 TICAM2Q86XR7 235 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
SNCA-211ENST00000508895 GPRC5AQ8NFJ5 357 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 CEP95Q96GE4 821 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 CCDC17Q96LX7 622 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 IL17RBQ9NRM6 502 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 FRMPD3Q5JV73 1810 aa10.33□□□□□ -0.76
SNCA-211ENST00000508895 CEP290O15078 2479 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 MCM3APO60318 1980 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 FGAP02671 866 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 HSPD1P10809 573 aaKnown RBP10.32□□□□□ -0.76
SNCA-211ENST00000508895 TAL1P17542 331 aaPredicted RBP10.32□□□□□ -0.76
SNCA-211ENST00000508895 DSG3P32926 999 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 PRMT2P55345 433 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 HAND2P61296 217 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 IRF5Q13568 498 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 MORN1Q5T089 497 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 LBX2Q6XYB7 198 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 TBC1D10CQ8IV04 446 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 REPS2Q8NFH8 660 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 NPLOC4Q8TAT6 608 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 MOV10L1Q9BXT6 1211 aaKnown RBP10.32□□□□□ -0.76
SNCA-211ENST00000508895 TANGO6Q9C0B7 1094 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 HELLSQ9NRZ9 838 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 CLIP2Q9UDT6 1046 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 RABGAP1Q9Y3P9 1069 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 RANBP2P49792 3224 aaKnown RBP10.32□□□□□ -0.76
SNCA-211ENST00000508895 PLXNA1Q9UIW2 1896 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 CCDC171Q6TFL3 1326 aa10.32□□□□□ -0.76
SNCA-211ENST00000508895 NDUFB10O96000 172 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 IGHA2P01877 340 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 GNAT2P19087 354 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 HOXD10P28358 340 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 MNX1P50219 401 aaPredicted RBP10.31□□□□□ -0.76
SNCA-211ENST00000508895 COG2Q14746 738 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 TMEM132BQ14DG7 1078 aa10.31□□□□□ -0.76
SNCA-211ENST00000508895 MCMDC2Q4G0Z9 681 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms