RNA–Protein interactions for RNA: ENST00000508777.5

RAI14-213, Transcript of retinoic acid induced 14, human

TSL 1 (best)

Gene RAI14, Length 1,387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAI14-213	ENST00000508777	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
RAI14-213	ENST00000508777	BRF1	Q92994	677 aa		10.17	□□□□□ -0.78
RAI14-213	ENST00000508777	MKL1	Q969V6	931 aa		10.17	□□□□□ -0.78
RAI14-213	ENST00000508777	CEP95	Q96GE4	821 aa		10.17	□□□□□ -0.78
RAI14-213	ENST00000508777	INCENP	Q9NQS7	918 aa		10.17	□□□□□ -0.78
RAI14-213	ENST00000508777	TSHZ2	Q9NRE2	1034 aa		10.17	□□□□□ -0.78
RAI14-213	ENST00000508777	RBM19	Q9Y4C8	960 aa	Known RBP	10.17	□□□□□ -0.78
RAI14-213	ENST00000508777	IGKV6D-41	A0A0C4DH26	115 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	FAM196B	A6NMK8	535 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	C19orf81	C9J6K1	198 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	KIF3C	O14782	793 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	ZBTB43	O43298	467 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	GNAQ	P50148	359 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	ANTXR2	P58335	489 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	SEC23A	Q15436	765 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	PRAMEF18	Q5VWM3	479 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	RCSD1	Q6JBY9	416 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	CHST3	Q7LGC8	479 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	ZKSCAN3	Q9BRR0	538 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	SLK	Q9H2G2	1235 aa	Predicted RBP	10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	LY9	Q9HBG7	655 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	GBA2	Q9HCG7	927 aa	Predicted RBP	10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	GOPC	Q9HD26	462 aa		10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	RBM28	Q9NW13	759 aa	Known RBP	10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	SCAF8	Q9UPN6	1271 aa	Known RBP	10.16	□□□□□ -0.78
RAI14-213	ENST00000508777	KLF18	A0A0U1RQI7	1052 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	SMIM22	K7EJ46	135 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777		K7ELQ4	463 aa	Predicted RBP	10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	CDKL5	O76039	1030 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	CELF2	O95319	508 aa	Known RBP	10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	GDF11	O95390	407 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	ITGBL1	O95965	494 aa	Predicted RBP	10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	HSP90AA1	P07900	732 aa	Known RBP	10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	ATP2B2	Q01814	1243 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	PPAT	Q06203	517 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	ERO1B	Q86YB8	467 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	PNMA1	Q8ND90	353 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	CTCFL	Q8NI51	663 aa	Predicted RBP	10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	LPAR1	Q92633	364 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	LZTS2	Q9BRK4	669 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	WDR18	Q9BV38	432 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	ZNF408	Q9H9D4	720 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	IL17RB	Q9NRM6	502 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	CLIP2	Q9UDT6	1046 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	TMX2	Q9Y320	296 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	KIF3A	Q9Y496	699 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	TACC3	Q9Y6A5	838 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	OTOF	Q9HC10	1997 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	SSC5D	A1L4H1	1573 aa		10.15	□□□□□ -0.78
RAI14-213	ENST00000508777	USP17L10	C9JJH3	530 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	EEF2	P13639	858 aa	Known RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	PDIA4	P13667	645 aa	Known RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	CPA1	P15085	419 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	INPP5B	P32019	993 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	TOB2	Q14106	344 aa	Predicted RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	SEPT2	Q15019	361 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	GPATCH4	Q5T3I0	446 aa	Known RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	APOA5	Q6Q788	366 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	ZNF654	Q8IZM8	581 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	ZNF280C	Q8ND82	737 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	GMCL1P1	Q8NEA9	526 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	SLC10A4	Q96EP9	437 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	TCEANC2	Q96MN5	208 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	FEZ1	Q99689	392 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	TMEM47	Q9BQJ4	181 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	MYH6	P13533	1939 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	PHIP	Q8WWQ0	1821 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	NID2	Q14112	1375 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	GOLGA8B	A8MQT2	603 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	CXCL11	O14625	94 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	CPLX1	O14810	134 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	PTPRA	P18433	802 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	SMARCA1	P28370	1054 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	METAP2	P50579	478 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	APOBR	Q0VD83	1088 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	PRKG1	Q13976	671 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	VGLL4	Q14135	290 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	ASPRV1	Q53RT3	343 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	LDLRAD1	Q5T700	205 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	FANCB	Q8NB91	859 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	DCAF4	Q8WV16	495 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	INTS4	Q96HW7	963 aa	Known RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	LLPH	Q9BRT6	129 aa	Known RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	KRTAP3-3	Q9BYR6	98 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	KRTAP3-2	Q9BYR7	98 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	LRRC2	Q9BYS8	371 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	KIAA1683	Q9H0B3	1180 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	TMOD4	Q9NZQ9	345 aa		10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	RBM27	Q9P2N5	1060 aa	Known RBP	10.14	□□□□□ -0.79
RAI14-213	ENST00000508777	PASK	Q96RG2	1323 aa		10.13	□□□□□ -0.79
RAI14-213	ENST00000508777	SPDYE5	A6NIY4	337 aa		10.13	□□□□□ -0.79
RAI14-213	ENST00000508777	GOLGA8A	A7E2F4	631 aa		10.13	□□□□□ -0.79
RAI14-213	ENST00000508777	TRAF5	O00463	557 aa		10.13	□□□□□ -0.79
RAI14-213	ENST00000508777	NMT2	O60551	498 aa		10.13	□□□□□ -0.79
RAI14-213	ENST00000508777	PFKFB2	O60825	505 aa		10.13	□□□□□ -0.79

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