RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.68■□□□□ 0.58
NFKB1-207ENST00000508584 MTMR4Q9NYA4 1195 aa18.68■□□□□ 0.58
NFKB1-207ENST00000508584 ORC3Q9UBD5 711 aaPredicted RBP18.68■□□□□ 0.58
NFKB1-207ENST00000508584 PGAP2Q9UHJ9 254 aa18.68■□□□□ 0.58
NFKB1-207ENST00000508584 TLL2Q9Y6L7 1015 aa18.68■□□□□ 0.58
NFKB1-207ENST00000508584 VPS37CA5D8V6 355 aaPredicted RBP18.67■□□□□ 0.58
NFKB1-207ENST00000508584 PPFIA3O75145 1194 aa18.67■□□□□ 0.58
NFKB1-207ENST00000508584 LBX1P52954 281 aa18.67■□□□□ 0.58
NFKB1-207ENST00000508584 GRM1Q13255 1194 aa18.67■□□□□ 0.58
NFKB1-207ENST00000508584 TRPM4Q8TD43 1214 aa18.67■□□□□ 0.58
NFKB1-207ENST00000508584 GBP4Q96PP9 640 aa18.67■□□□□ 0.58
NFKB1-207ENST00000508584 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
NFKB1-207ENST00000508584 GLIS2Q9BZE0 524 aaPredicted RBP18.67■□□□□ 0.58
NFKB1-207ENST00000508584 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
NFKB1-207ENST00000508584 STK36Q9NRP7 1315 aa18.67■□□□□ 0.58
NFKB1-207ENST00000508584 TBC1D12O60347 775 aa18.66■□□□□ 0.58
NFKB1-207ENST00000508584 CELF2O95319 508 aaKnown RBP18.66■□□□□ 0.58
NFKB1-207ENST00000508584 FMNL1O95466 1100 aaPredicted RBP18.66■□□□□ 0.58
NFKB1-207ENST00000508584 KIF5BP33176 963 aa18.66■□□□□ 0.58
NFKB1-207ENST00000508584 SSRP1Q08945 709 aaKnown RBP18.66■□□□□ 0.58
NFKB1-207ENST00000508584 NFKBIBQ15653 356 aa18.66■□□□□ 0.58
NFKB1-207ENST00000508584 CYP4F22Q6NT55 531 aa18.66■□□□□ 0.58
NFKB1-207ENST00000508584 CDC37L1Q7L3B6 337 aa18.66■□□□□ 0.58
NFKB1-207ENST00000508584 PHKBQ93100 1093 aa18.66■□□□□ 0.58
NFKB1-207ENST00000508584 BEGAINQ9BUH8 593 aa18.66■□□□□ 0.58
NFKB1-207ENST00000508584 H3BQV1 296 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 TTLL1O95922 423 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
NFKB1-207ENST00000508584 GRM4Q14833 912 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 ABCB5Q2M3G0 1257 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 CLEC17AQ6ZS10 378 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 TMEM179Q6ZVK1 233 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 TMTC3Q6ZXV5 915 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 APOBEC3FQ8IUX4 373 aaKnown RBP18.65■□□□□ 0.58
NFKB1-207ENST00000508584 CDAN1Q8IWY9 1227 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 TRIM22Q8IYM9 498 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 SLC26A6Q9BXS9 759 aa18.65■□□□□ 0.58
NFKB1-207ENST00000508584 F13A1P00488 732 aa18.64■□□□□ 0.57
NFKB1-207ENST00000508584 HSPA8P11142 646 aaKnown RBP18.64■□□□□ 0.57
NFKB1-207ENST00000508584 FOSBP53539 338 aa18.64■□□□□ 0.57
NFKB1-207ENST00000508584 ANGEL2Q5VTE6 544 aaKnown RBP18.64■□□□□ 0.57
NFKB1-207ENST00000508584 NBPF11Q86T75 865 aa18.64■□□□□ 0.57
NFKB1-207ENST00000508584 WASF1Q92558 559 aa18.64■□□□□ 0.57
NFKB1-207ENST00000508584 TEPSINQ96N21 525 aa18.64■□□□□ 0.57
NFKB1-207ENST00000508584 ZNF408Q9H9D4 720 aa18.64■□□□□ 0.57
NFKB1-207ENST00000508584 KANSL2Q9H9L4 492 aa18.64■□□□□ 0.57
NFKB1-207ENST00000508584 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
NFKB1-207ENST00000508584 GDF11O95390 407 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 PLEKHA8P1O95397 391 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 BAG4O95429 457 aaKnown RBP18.63■□□□□ 0.57
NFKB1-207ENST00000508584 GNAQP50148 359 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 MAP3K10Q02779 954 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 SAPCD2Q86UD0 394 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 CLEC10AQ8IUN9 316 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 CMTR1Q8N1G2 835 aaKnown RBP18.63■□□□□ 0.57
NFKB1-207ENST00000508584 C8orf76Q96K31 380 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 ALG1Q9BT22 464 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 DEFB129Q9H1M3 183 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 CABP5Q9NP86 173 aa18.63■□□□□ 0.57
NFKB1-207ENST00000508584 SCAF8Q9UPN6 1271 aaKnown RBP18.63■□□□□ 0.57
NFKB1-207ENST00000508584 MCM4P33991 863 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 MAP2K2P36507 400 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 FUT2Q10981 343 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 RRP1BQ14684 758 aaKnown RBP18.62■□□□□ 0.57
NFKB1-207ENST00000508584 SEPT2Q15019 361 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 SHROOM1Q2M3G4 852 aaPredicted RBP18.62■□□□□ 0.57
NFKB1-207ENST00000508584 MIGA2Q7L4E1 593 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 LRRC47Q8N1G4 583 aaKnown RBP18.62■□□□□ 0.57
NFKB1-207ENST00000508584 CCDC82Q8N4S0 544 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 RGS22Q8NE09 1264 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 HHIPL1Q96JK4 782 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 RNF26Q9BY78 433 aaPredicted RBP18.62■□□□□ 0.57
NFKB1-207ENST00000508584 GGA3Q9NZ52 723 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 NYAP2Q9P242 653 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 ATP6V1DQ9Y5K8 247 aa18.62■□□□□ 0.57
NFKB1-207ENST00000508584 PRPF3O43395 683 aaKnown RBP18.61■□□□□ 0.57
NFKB1-207ENST00000508584 DEXIO95424 95 aa18.61■□□□□ 0.57
NFKB1-207ENST00000508584 GH2P01242 217 aa18.61■□□□□ 0.57
NFKB1-207ENST00000508584 GUCY1A2P33402 732 aa18.61■□□□□ 0.57
NFKB1-207ENST00000508584 JAG1P78504 1218 aa18.61■□□□□ 0.57
NFKB1-207ENST00000508584 ATP2B2Q01814 1243 aa18.61■□□□□ 0.57
NFKB1-207ENST00000508584 AKAP17AQ02040 695 aaKnown RBP18.61■□□□□ 0.57
NFKB1-207ENST00000508584 SRBD1Q8N5C6 995 aaKnown RBP18.61■□□□□ 0.57
NFKB1-207ENST00000508584 LZTS2Q9BRK4 669 aa18.61■□□□□ 0.57
NFKB1-207ENST00000508584 MAD2L2Q9UI95 211 aa18.61■□□□□ 0.57
NFKB1-207ENST00000508584 MTMR7Q9Y216 660 aa18.61■□□□□ 0.57
NFKB1-207ENST00000508584 GREB1LQ9C091 1923 aaPredicted RBP18.61■□□□□ 0.57
NFKB1-207ENST00000508584 CNTNAP5Q8WYK1 1306 aa18.6■□□□□ 0.57
NFKB1-207ENST00000508584 PALM3A6NDB9 673 aaPredicted RBP18.6■□□□□ 0.57
NFKB1-207ENST00000508584 PARP1P09874 1014 aaKnown RBP18.6■□□□□ 0.57
NFKB1-207ENST00000508584 EEF2P13639 858 aaKnown RBP18.6■□□□□ 0.57
NFKB1-207ENST00000508584 ICA1Q05084 483 aa18.6■□□□□ 0.57
NFKB1-207ENST00000508584 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
NFKB1-207ENST00000508584 MKL1Q969V6 931 aa18.6■□□□□ 0.57
NFKB1-207ENST00000508584 PPP2R3BQ9Y5P8 575 aa18.6■□□□□ 0.57
NFKB1-207ENST00000508584 PITPNM2Q9BZ72 1349 aa18.59■□□□□ 0.57
NFKB1-207ENST00000508584 USP17L5A8MUK1 530 aa18.59■□□□□ 0.57
NFKB1-207ENST00000508584 AOC2O75106 756 aa18.59■□□□□ 0.57
NFKB1-207ENST00000508584 GUCY1B3Q02153 619 aa18.59■□□□□ 0.57
NFKB1-207ENST00000508584 FERMT3Q86UX7 667 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms