RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 SLC3A2P08195 630 aaKnown RBP11.18□□□□□ -0.62
DDX41-209ENST00000508279 RASA1P20936 1047 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 GRK4P32298 578 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 FLT3LGP49771 235 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 CTDSPL2Q05D32 466 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 PDE4BQ07343 736 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 PPARAQ07869 468 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 KIAA1755Q5JYT7 1200 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 ARMC5Q96C12 935 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 KANSL2Q9H9L4 492 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 ZNF287Q9HBT7 754 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 TOMM22Q9NS69 142 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 DIAPH3Q9NSV4 1193 aa11.18□□□□□ -0.62
DDX41-209ENST00000508279 COL11A1P12107 1806 aaPredicted RBP11.17□□□□□ -0.62
DDX41-209ENST00000508279 ADCY3O60266 1144 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 ELNP15502 786 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 SDSP20132 328 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 PDE4AP27815 886 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 ERVK-9P63128 1117 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 ERVK-24P63145 666 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 Q3C1V9 767 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 FAM47AQ5JRC9 791 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 CWC27Q6UX04 472 aaKnown RBP11.17□□□□□ -0.62
DDX41-209ENST00000508279 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
DDX41-209ENST00000508279 SIAH1Q8IUQ4 282 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 GTF3C2Q8WUA4 911 aaPredicted RBP11.17□□□□□ -0.62
DDX41-209ENST00000508279 CHMP4CQ96CF2 233 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 OSBPL3Q9H4L5 887 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 VCPKMTQ9H867 229 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 INCENPQ9NQS7 918 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 RBPJLQ9UBG7 517 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
DDX41-209ENST00000508279 TMX2Q9Y320 296 aa11.17□□□□□ -0.62
DDX41-209ENST00000508279 GREB1LQ9C091 1923 aaPredicted RBP11.17□□□□□ -0.62
DDX41-209ENST00000508279 ROBO3Q96MS0 1386 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
DDX41-209ENST00000508279 FLOT1O75955 427 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 EN2P19622 333 aaPredicted RBP11.16□□□□□ -0.62
DDX41-209ENST00000508279 CYP2B6P20813 491 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 RGS19P49795 217 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 HAND2P61296 217 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 UBXN2AP68543 259 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 TFAP4Q01664 338 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 PLS1Q14651 629 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 MTFR1Q15390 333 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 RRP12Q5JTH9 1297 aaKnown RBP11.16□□□□□ -0.62
DDX41-209ENST00000508279 PORCNQ9H237 461 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 GOPCQ9HD26 462 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 MORF4L1Q9UBU8 362 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 PARP14Q460N5 1801 aa11.16□□□□□ -0.62
DDX41-209ENST00000508279 RLFQ13129 1914 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 CCDC171Q6TFL3 1326 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 FOXP2O15409 715 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 RANBP6O60518 1105 aaKnown RBP11.15□□□□□ -0.62
DDX41-209ENST00000508279 CNMDO75829 334 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 HSPD1P10809 573 aaKnown RBP11.15□□□□□ -0.62
DDX41-209ENST00000508279 MFAP1P55081 439 aaKnown RBP11.15□□□□□ -0.62
DDX41-209ENST00000508279 CCNA1P78396 465 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 COG2Q14746 738 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 FAM83BQ5T0W9 1011 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 POTEEQ6S8J3 1075 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 SLAIN1Q8ND83 568 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 LPAR1Q92633 364 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 CEP95Q96GE4 821 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 NUP88Q99567 741 aaPredicted RBP11.15□□□□□ -0.62
DDX41-209ENST00000508279 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.15□□□□□ -0.62
DDX41-209ENST00000508279 BTBD7Q9P203 1132 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 MTMR7Q9Y216 660 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 RABGAP1Q9Y3P9 1069 aa11.15□□□□□ -0.62
DDX41-209ENST00000508279 RBBP6Q7Z6E9 1792 aaKnown RBP11.15□□□□□ -0.62
DDX41-209ENST00000508279 ZNFX1Q9P2E3 1918 aaKnown RBP11.14□□□□□ -0.63
DDX41-209ENST00000508279 HIP1O00291 1037 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 WDR46O15213 610 aaKnown RBP11.14□□□□□ -0.63
DDX41-209ENST00000508279 FGAP02671 866 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 INHAP05111 366 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 CCL5P13501 91 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 MAPK4P31152 587 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 TTC22Q5TAA0 569 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 GPR142Q7Z601 462 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 PLEKHH3Q7Z736 793 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 LRRC47Q8N1G4 583 aaKnown RBP11.14□□□□□ -0.63
DDX41-209ENST00000508279 ATG4CQ96DT6 458 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 NUDT12Q9BQG2 462 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 RNF208Q9H0X6 261 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 FBXO28Q9NVF7 368 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 HOXC10Q9NYD6 342 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 NYAP2Q9P242 653 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 IVNS1ABPQ9Y6Y0 642 aa11.14□□□□□ -0.63
DDX41-209ENST00000508279 TTLL1O95922 423 aa11.13□□□□□ -0.63
DDX41-209ENST00000508279 GSPT1P15170 499 aaKnown RBP11.13□□□□□ -0.63
DDX41-209ENST00000508279 DSG3P32926 999 aa11.13□□□□□ -0.63
DDX41-209ENST00000508279 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
DDX41-209ENST00000508279 IRF5Q13568 498 aa11.13□□□□□ -0.63
DDX41-209ENST00000508279 UNC93B1Q9H1C4 597 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms