RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 MAP4K4O95819 1239 aaPredicted RBP11.05□□□□□ -0.64
RPS3A-206ENST00000507485 MTMR2Q13614 643 aa11.05□□□□□ -0.64
RPS3A-206ENST00000507485 NAA16Q6N069 864 aaPredicted RBP11.05□□□□□ -0.64
RPS3A-206ENST00000507485 NUDT18Q6ZVK8 323 aa11.05□□□□□ -0.64
RPS3A-206ENST00000507485 METTL16Q86W50 562 aaKnown RBP11.05□□□□□ -0.64
RPS3A-206ENST00000507485 GPR108Q9NPR9 543 aa11.05□□□□□ -0.64
RPS3A-206ENST00000507485 PALD1Q9ULE6 856 aa11.05□□□□□ -0.64
RPS3A-206ENST00000507485 TTC39AQ5SRH9 613 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 EAF2Q96CJ1 260 aaPredicted RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 PAWRQ96IZ0 340 aaKnown RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 WDR18Q9BV38 432 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 MORF4L1Q9UBU8 362 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 SAP30BPQ9UHR5 308 aaKnown RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 HERC5Q9UII4 1024 aaKnown RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 SURF6O75683 361 aaKnown RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 TFRCP02786 760 aaKnown RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 BACE1P56817 501 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 Q3C1V9 767 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 TRIB2Q92519 343 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 COA7Q96BR5 231 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 HTATIP2Q9BUP3 242 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 TMUB1Q9BVT8 246 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 PI4KBQ9UBF8 816 aa11.04□□□□□ -0.64
RPS3A-206ENST00000507485 NOP58Q9Y2X3 529 aaKnown RBP11.04□□□□□ -0.64
RPS3A-206ENST00000507485 MYH1P12882 1939 aa11.03□□□□□ -0.64
RPS3A-206ENST00000507485 DDX60LQ5H9U9 1706 aaKnown RBP11.03□□□□□ -0.64
RPS3A-206ENST00000507485 GCLCP48506 637 aaPredicted RBP11.03□□□□□ -0.64
RPS3A-206ENST00000507485 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
RPS3A-206ENST00000507485 ZNF512BQ96KM6 892 aaPredicted RBP11.03□□□□□ -0.64
RPS3A-206ENST00000507485 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
RPS3A-206ENST00000507485 RBPJLQ9UBG7 517 aa11.03□□□□□ -0.64
RPS3A-206ENST00000507485 ZBTB21Q9ULJ3 1066 aa11.03□□□□□ -0.64
RPS3A-206ENST00000507485 C3orf80F5H4A9 247 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 HMGCRP04035 888 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
RPS3A-206ENST00000507485 HERVK_113P62684 666 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 E2F4Q16254 413 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 CCDC158Q5M9N0 1113 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 MIGA1Q8NAN2 632 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 TBC1D2Q9BYX2 928 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 PORCNQ9H237 461 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 AS3MTQ9HBK9 375 aa11.02□□□□□ -0.65
RPS3A-206ENST00000507485 CNMDO75829 334 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 BAG3O95817 575 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 ASNSP08243 561 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 CYP2B6P20813 491 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 CYP7A1P22680 504 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 OS9Q13438 667 aaPredicted RBP11.01□□□□□ -0.65
RPS3A-206ENST00000507485 CCL14Q16627 93 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 MAP3K21Q5TCX8 1036 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 FOXP4Q8IVH2 680 aaPredicted RBP11.01□□□□□ -0.65
RPS3A-206ENST00000507485 USP6NLQ92738 828 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 STAP2Q9UGK3 403 aa11.01□□□□□ -0.65
RPS3A-206ENST00000507485 USP17L10C9JJH3 530 aa11□□□□□ -0.65
RPS3A-206ENST00000507485 GH2P01242 217 aa11□□□□□ -0.65
RPS3A-206ENST00000507485 IRX3P78415 501 aaPredicted RBP11□□□□□ -0.65
RPS3A-206ENST00000507485 PABPC4Q13310 644 aaKnown RBP eCLIP11□□□□□ -0.651e-8■□□□□ 9.9
RPS3A-206ENST00000507485 TATDN1Q6P1N9 297 aa11□□□□□ -0.65
RPS3A-206ENST00000507485 CEP85Q6P2H3 762 aa11□□□□□ -0.65
RPS3A-206ENST00000507485 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
RPS3A-206ENST00000507485 NOL10Q9BSC4 688 aaKnown RBP11□□□□□ -0.65
RPS3A-206ENST00000507485 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
RPS3A-206ENST00000507485 NR2E3Q9Y5X4 410 aa11□□□□□ -0.65
RPS3A-206ENST00000507485 PFASO15067 1338 aa11□□□□□ -0.65
RPS3A-206ENST00000507485 RPTORQ8N122 1335 aa11□□□□□ -0.65
RPS3A-206ENST00000507485 IDH1O75874 414 aaKnown RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 GUCY1A2P33402 732 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 ZYXQ15942 572 aaKnown RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 CRACR2BQ8N4Y2 399 aaPredicted RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 MAGEB6Q8N7X4 407 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 ACER1Q8TDN7 264 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 TMOD4Q9NZQ9 345 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 ZMYND8Q9ULU4 1186 aaPredicted RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 ARIH1Q9Y4X5 557 aaPredicted RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 FRMPD3Q5JV73 1810 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 LAMA3Q16787 3333 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 C19orf81C9J6K1 198 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 CCND3P30281 292 aaPredicted RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 PLCD1P51178 756 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 COPS2P61201 443 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 ERVK-24P63145 666 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 CACNB2Q08289 660 aaPredicted RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 MORN1Q5T089 497 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 NECAB2Q7Z6G3 386 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 C7orf61Q8IZ16 206 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 GPRC5AQ8NFJ5 357 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 PANK1Q8TE04 598 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 ZNF775Q96BV0 537 aaPredicted RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 GDF15Q99988 308 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 RIOK1Q9BRS2 568 aaKnown RBP10.99□□□□□ -0.65
RPS3A-206ENST00000507485 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
RPS3A-206ENST00000507485 HMX1Q9NP08 348 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms