RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 USP34Q70CQ2 3546 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 IGHA2P01877 340 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 ASNSP08243 561 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 CYP2C18P33260 490 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 TWISTNBQ3B726 338 aaPredicted RBP9.01□□□□□ -0.97
VCAN-207ENST00000507162 FAM178BQ8IXR5 827 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 VGLL2Q8N8G2 317 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 KLHDC4Q8TBB5 520 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 ARNTL2Q8WYA1 636 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 SLC5A4Q9NY91 659 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 TBX21Q9UL17 535 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 PCDHA11Q9Y5I1 949 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 TRIOO75962 3097 aa9.01□□□□□ -0.97
VCAN-207ENST00000507162 EPOPA6NHQ4 379 aa9□□□□□ -0.97
VCAN-207ENST00000507162 APAF1O14727 1248 aa9□□□□□ -0.97
VCAN-207ENST00000507162 DCXO43602 365 aa9□□□□□ -0.97
VCAN-207ENST00000507162 STRNO43815 780 aa9□□□□□ -0.97
VCAN-207ENST00000507162 GDF11O95390 407 aa9□□□□□ -0.97
VCAN-207ENST00000507162 POU3F3P20264 500 aaPredicted RBP9□□□□□ -0.97
VCAN-207ENST00000507162 FGFR2P21802 821 aa9□□□□□ -0.97
VCAN-207ENST00000507162 ACLYP53396 1101 aa9□□□□□ -0.97
VCAN-207ENST00000507162 SHROOM1Q2M3G4 852 aaPredicted RBP9□□□□□ -0.97
VCAN-207ENST00000507162 TMEM67Q5HYA8 995 aa9□□□□□ -0.97
VCAN-207ENST00000507162 HFE2Q6ZVN8 426 aa9□□□□□ -0.97
VCAN-207ENST00000507162 LPIN2Q92539 896 aa9□□□□□ -0.97
VCAN-207ENST00000507162 MFSD14AQ96MC6 490 aa9□□□□□ -0.97
VCAN-207ENST00000507162 FEZ1Q99689 392 aa9□□□□□ -0.97
VCAN-207ENST00000507162 TRIM34Q9BYJ4 488 aa9□□□□□ -0.97
VCAN-207ENST00000507162 DENND2AQ9ULE3 1009 aa9□□□□□ -0.97
VCAN-207ENST00000507162 GAKO14976 1311 aa9□□□□□ -0.97
VCAN-207ENST00000507162 DOCK2Q92608 1830 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 C5orf42Q9H799 3197 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 GFRA3O60609 400 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 CA3P07451 260 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 ATP2A2P16615 1042 aaKnown RBP8.99□□□□□ -0.97
VCAN-207ENST00000507162 RHBDL3P58872 404 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 KCNA10Q16322 511 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 SLC4A10Q6U841 1118 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 CATSPERGQ6ZRH7 1159 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
VCAN-207ENST00000507162 FAM163AQ96GL9 167 aaPredicted RBP8.99□□□□□ -0.97
VCAN-207ENST00000507162 TSEN34Q9BSV6 310 aaKnown RBP8.99□□□□□ -0.97
VCAN-207ENST00000507162 PI4KBQ9UBF8 816 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 HERC5Q9UII4 1024 aaKnown RBP8.99□□□□□ -0.97
VCAN-207ENST00000507162 LOC285556D6RIA3 1793 aa8.99□□□□□ -0.97
VCAN-207ENST00000507162 LRRC37A2A6NM11 1700 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 GPR75-ASB3A0A0A6YYF3 556 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 TLR3O15455 904 aaKnown RBP8.98□□□□□ -0.97
VCAN-207ENST00000507162 TAL1P17542 331 aaPredicted RBP8.98□□□□□ -0.97
VCAN-207ENST00000507162 ERCC3P19447 782 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 CCL23P55773 120 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 PLS1Q14651 629 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 CRACR2BQ8N4Y2 399 aaPredicted RBP8.98□□□□□ -0.97
VCAN-207ENST00000507162 ZGPATQ8N5A5 531 aaKnown RBP8.98□□□□□ -0.97
VCAN-207ENST00000507162 CCER1Q8TC90 406 aaPredicted RBP8.98□□□□□ -0.97
VCAN-207ENST00000507162 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 GLT1D1Q96MS3 346 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 MOV10L1Q9BXT6 1211 aaKnown RBP8.98□□□□□ -0.97
VCAN-207ENST00000507162 BICC1Q9H694 974 aaKnown RBP8.98□□□□□ -0.97
VCAN-207ENST00000507162 KIF16BQ96L93 1317 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 EPG5Q9HCE0 2579 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 CHD8Q9HCK8 2581 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 CACNA1HO95180 2353 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 TPRP12270 2363 aaKnown RBP8.98□□□□□ -0.97
VCAN-207ENST00000507162 RFX7Q2KHR2 1363 aa8.98□□□□□ -0.97
VCAN-207ENST00000507162 ZNF318Q5VUA4 2279 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 WDR87Q6ZQQ6 2873 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 NBPF7P0C2Y1 421 aaPredicted RBP8.97□□□□□ -0.97
VCAN-207ENST00000507162 IL9P15248 144 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 KCNA5P22460 613 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 PHKA1P46020 1223 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 CDK7P50613 346 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 PTPN5P54829 565 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 GRB10Q13322 594 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 IER5LQ5T953 404 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 SPTY2D1Q68D10 685 aaPredicted RBP8.97□□□□□ -0.97
VCAN-207ENST00000507162 POTEGQ6S5H5 508 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 NCAPG2Q86XI2 1143 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 PRSS33Q8NF86 280 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 CDCA7LQ96GN5 454 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 MAML3Q96JK9 1138 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 MROH7-TTC4A0A0A0MT08 1334 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 MROH7Q68CQ1 1323 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 SALL1Q9NSC2 1324 aa8.97□□□□□ -0.97
VCAN-207ENST00000507162 MYH2Q9UKX2 1941 aa8.96□□□□□ -0.97
VCAN-207ENST00000507162 POTEB3A0JP26 581 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 MOXD2PA6NHM9 499 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 SPDYE16A6NNV3 312 aaPredicted RBP8.96□□□□□ -0.98
VCAN-207ENST00000507162 ARVCFO00192 962 aa8.96□□□□□ -0.98
VCAN-207ENST00000507162 KRT37O76014 449 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms