RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 FAM110CQ1W6H9 321 aa22.9■■□□□ 1.26
LMNA-221ENST00000506981 RRP12Q5JTH9 1297 aaKnown RBP22.9■■□□□ 1.26
LMNA-221ENST00000506981 FBXO46Q6PJ61 603 aaPredicted RBP22.9■■□□□ 1.26
LMNA-221ENST00000506981 NEDD1Q8NHV4 660 aa22.9■■□□□ 1.26
LMNA-221ENST00000506981 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.9■■□□□ 1.26
LMNA-221ENST00000506981 TANGO6Q9C0B7 1094 aa22.9■■□□□ 1.26
LMNA-221ENST00000506981 RNF41Q9H4P4 317 aaPredicted RBP22.9■■□□□ 1.26
LMNA-221ENST00000506981 NYAP2Q9P242 653 aa22.9■■□□□ 1.26
LMNA-221ENST00000506981 RLFQ13129 1914 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 ORC4O43929 436 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 GNRH1P01148 92 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 PSMC4P43686 418 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 FCGRTP55899 365 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 IMMTQ16891 758 aaKnown RBP22.89■■□□□ 1.25
LMNA-221ENST00000506981 FAM47AQ5JRC9 791 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 CATSPERGQ6ZRH7 1159 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 MFSD6Q6ZSS7 791 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 SIAH1Q8IUQ4 282 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 ABHD8Q96I13 439 aa22.89■■□□□ 1.25
LMNA-221ENST00000506981 P2RX7Q99572 595 aaKnown RBP22.89■■□□□ 1.25
LMNA-221ENST00000506981 COL11A1P12107 1806 aaPredicted RBP22.89■■□□□ 1.25
LMNA-221ENST00000506981 WDR46O15213 610 aaKnown RBP22.88■■□□□ 1.25
LMNA-221ENST00000506981 FMNL1O95466 1100 aaPredicted RBP22.88■■□□□ 1.25
LMNA-221ENST00000506981 TTLL1O95922 423 aa22.88■■□□□ 1.25
LMNA-221ENST00000506981 HOXD10P28358 340 aa22.88■■□□□ 1.25
LMNA-221ENST00000506981 AKNAD1Q5T1N1 836 aa22.88■■□□□ 1.25
LMNA-221ENST00000506981 SPICE1Q8N0Z3 855 aa22.88■■□□□ 1.25
LMNA-221ENST00000506981 CEP95Q96GE4 821 aa22.88■■□□□ 1.25
LMNA-221ENST00000506981 IGKV6D-41A0A0C4DH26 115 aa22.87■■□□□ 1.25
LMNA-221ENST00000506981 STAG1Q8WVM7 1258 aa22.87■■□□□ 1.25
LMNA-221ENST00000506981 ARHGAP39Q9C0H5 1083 aa22.87■■□□□ 1.25
LMNA-221ENST00000506981 IL25Q9H293 177 aa22.87■■□□□ 1.25
LMNA-221ENST00000506981 INCENPQ9NQS7 918 aa22.87■■□□□ 1.25
LMNA-221ENST00000506981 MTMR4Q9NYA4 1195 aa22.87■■□□□ 1.25
LMNA-221ENST00000506981 CLIP2Q9UDT6 1046 aa22.87■■□□□ 1.25
LMNA-221ENST00000506981 A0A0G2JMZ2 1700 aa22.87■■□□□ 1.25
LMNA-221ENST00000506981 SGSM2O43147 1006 aa22.86■■□□□ 1.25
LMNA-221ENST00000506981 FGRP09769 529 aa22.86■■□□□ 1.25
LMNA-221ENST00000506981 CASC1Q6TDU7 716 aa22.86■■□□□ 1.25
LMNA-221ENST00000506981 PAGR1Q9BTK6 254 aa22.86■■□□□ 1.25
LMNA-221ENST00000506981 PRMT2P55345 433 aa22.85■■□□□ 1.25
LMNA-221ENST00000506981 KIAA1211Q6ZU35 1233 aa22.85■■□□□ 1.25
LMNA-221ENST00000506981 TBC1D10CQ8IV04 446 aa22.85■■□□□ 1.25
LMNA-221ENST00000506981 TRIM47Q96LD4 638 aa22.85■■□□□ 1.25
LMNA-221ENST00000506981 MORF4L1Q9UBU8 362 aa22.85■■□□□ 1.25
LMNA-221ENST00000506981 SYNPO2Q9UMS6 1093 aa22.85■■□□□ 1.25
LMNA-221ENST00000506981 PTPN22Q9Y2R2 807 aa22.85■■□□□ 1.25
LMNA-221ENST00000506981 TNPO2O14787 897 aaKnown RBP22.84■■□□□ 1.25
LMNA-221ENST00000506981 FLOT1O75955 427 aa22.84■■□□□ 1.25
LMNA-221ENST00000506981 NT5C2P49902 561 aa22.84■■□□□ 1.25
LMNA-221ENST00000506981 COG2Q14746 738 aa22.84■■□□□ 1.25
LMNA-221ENST00000506981 KIAA1755Q5JYT7 1200 aa22.84■■□□□ 1.25
LMNA-221ENST00000506981 CCAR1Q8IX12 1150 aaKnown RBP22.84■■□□□ 1.25
LMNA-221ENST00000506981 GPRC5AQ8NFJ5 357 aa22.84■■□□□ 1.25
LMNA-221ENST00000506981 ESR2Q92731 530 aa22.84■■□□□ 1.25
LMNA-221ENST00000506981 HOXC10Q9NYD6 342 aa22.84■■□□□ 1.25
LMNA-221ENST00000506981 STX8Q9UNK0 236 aa22.84■■□□□ 1.25
LMNA-221ENST00000506981 U3KPZ7 1027 aaPredicted RBP22.84■■□□□ 1.25
LMNA-221ENST00000506981 CAP1Q01518 475 aa22.83■■□□□ 1.25
LMNA-221ENST00000506981 SAMD1Q6SPF0 538 aaPredicted RBP22.83■■□□□ 1.25
LMNA-221ENST00000506981 LRRC47Q8N1G4 583 aaKnown RBP22.83■■□□□ 1.25
LMNA-221ENST00000506981 MKL1Q969V6 931 aa22.83■■□□□ 1.25
LMNA-221ENST00000506981 COA7Q96BR5 231 aa22.83■■□□□ 1.25
LMNA-221ENST00000506981 HPS5Q9UPZ3 1129 aa22.83■■□□□ 1.25
LMNA-221ENST00000506981 RABGAP1Q9Y3P9 1069 aa22.83■■□□□ 1.25
LMNA-221ENST00000506981 TACC3Q9Y6A5 838 aa22.83■■□□□ 1.25
LMNA-221ENST00000506981 MYPNQ86TC9 1320 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 PLXNB2O15031 1838 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 SPDYE16A6NNV3 312 aaPredicted RBP22.82■■□□□ 1.24
LMNA-221ENST00000506981 F5H6K3 240 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 CAPN15O75808 1086 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 ERVK-9P63128 1117 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 ERVK-24P63145 666 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 CCNA1P78396 465 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 KLRC3Q07444 240 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 LBX2Q6XYB7 198 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 ESYT1Q9BSJ8 1104 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 NBPF3Q9H094 633 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 CWC22Q9HCG8 908 aaKnown RBP22.82■■□□□ 1.24
LMNA-221ENST00000506981 SRRDQ9UH36 339 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 NEDD4P46934 1319 aa22.82■■□□□ 1.24
LMNA-221ENST00000506981 CCDC85CA6NKD9 419 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 CDC45O75419 566 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 NDUFB10O96000 172 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 CTGFP29279 349 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 PTH1RQ03431 593 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 FAM83BQ5T0W9 1011 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 GMCL1P1Q8NEA9 526 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 CNNM2Q9H8M5 875 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 TXNRD2Q9NNW7 524 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 RBPJLQ9UBG7 517 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 ISY1Q9ULR0 285 aaKnown RBP22.81■■□□□ 1.24
LMNA-221ENST00000506981 PTCH2Q9Y6C5 1203 aa22.81■■□□□ 1.24
LMNA-221ENST00000506981 NMT2O60551 498 aa22.8■■□□□ 1.24
LMNA-221ENST00000506981 IFFO2Q5TF58 517 aa22.8■■□□□ 1.24
LMNA-221ENST00000506981 MB21D1Q8N884 522 aa22.8■■□□□ 1.24
LMNA-221ENST00000506981 RAET1EQ8TD07 263 aa22.8■■□□□ 1.24
LMNA-221ENST00000506981 KRT23Q9C075 422 aa22.8■■□□□ 1.24
LMNA-221ENST00000506981 IL17RBQ9NRM6 502 aa22.8■■□□□ 1.24
LMNA-221ENST00000506981 DSG3P32926 999 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms