RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 PTF1AQ7RTS3 328 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 STAG2Q8N3U4 1231 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
PHF3-208ENST00000506783 ZNF446Q9NWS9 450 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
PHF3-208ENST00000506783 DEXIO95424 95 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 MMP1P03956 469 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
PHF3-208ENST00000506783 KLK7P49862 253 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 CCDC122Q5T0U0 273 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 C3orf67Q6ZVT6 689 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 CRACR2BQ8N4Y2 399 aaPredicted RBP10.84□□□□□ -0.67
PHF3-208ENST00000506783 ANKRD7Q92527 254 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 SLC4A9Q96Q91 983 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 FEZ1Q99689 392 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 TACC3Q9Y6A5 838 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 A0A087X0B3 334 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 ATP2C2O75185 946 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 KRT18P05783 430 aaKnown RBP10.84□□□□□ -0.67
PHF3-208ENST00000506783 PDIA4P13667 645 aaKnown RBP10.84□□□□□ -0.67
PHF3-208ENST00000506783 TECP42680 631 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 NELFBQ8WX92 580 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 ZNF622Q969S3 477 aaKnown RBP eCLIP10.84□□□□□ -0.679e-7■□□□□ 10.2
PHF3-208ENST00000506783 SLC39A2Q9NP94 309 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 CCDC87Q9NVE4 849 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 BCS1LQ9Y276 419 aa10.84□□□□□ -0.67
PHF3-208ENST00000506783 A0A1W2PQ27 194 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 A0A1W2PQ64 194 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 A0A1W2PQD8 194 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 FXR1P51114 621 aaKnown RBP eCLIP10.83□□□□□ -0.68
PHF3-208ENST00000506783 TERF2Q15554 542 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 RILPL1Q5EBL4 403 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 NELFCDQ8IXH7 590 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 TMEM87BQ96K49 555 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 ITSN1Q15811 1721 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 FAM196BA6NMK8 535 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 CCNT1O60563 726 aaKnown RBP10.83□□□□□ -0.68
PHF3-208ENST00000506783 HNRNPH2P55795 449 aaKnown RBP10.83□□□□□ -0.68
PHF3-208ENST00000506783 SNAP25P60880 206 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 KRT26Q7Z3Y9 468 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 VSTM4Q8IW00 320 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 ENAHQ8N8S7 591 aaPredicted RBP10.83□□□□□ -0.68
PHF3-208ENST00000506783 BMP2KQ9NSY1 1161 aaPredicted RBP10.83□□□□□ -0.68
PHF3-208ENST00000506783 SEPT11Q9NVA2 429 aaKnown RBP10.83□□□□□ -0.68
PHF3-208ENST00000506783 DACH1Q9UI36 760 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 ARHGAP6O43182 974 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 TNNI2P48788 182 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 NAPAP54920 295 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 SLC7A5Q01650 507 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 GPS2Q13227 327 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 TRAPPC3LQ5T215 181 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 USP17L2Q6R6M4 530 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 RAD9BQ6WBX8 426 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 LRP10Q7Z4F1 713 aa10.83□□□□□ -0.68
PHF3-208ENST00000506783 GJD4Q96KN9 370 aaPredicted RBP10.83□□□□□ -0.68
PHF3-208ENST00000506783 RNF41Q9H4P4 317 aaPredicted RBP10.83□□□□□ -0.68
PHF3-208ENST00000506783 B4DLN1 442 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 UTYO14607 1347 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 BUB1O43683 1085 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 PLS1Q14651 629 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 CDCA7Q9BWT1 371 aaPredicted RBP10.82□□□□□ -0.68
PHF3-208ENST00000506783 GTPBP4Q9BZE4 634 aaKnown RBP10.82□□□□□ -0.68
PHF3-208ENST00000506783 FAM217BQ9NTX9 383 aaPredicted RBP10.82□□□□□ -0.68
PHF3-208ENST00000506783 CEP131Q9UPN4 1083 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 DUSP10Q9Y6W6 482 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 CCDC66A2RUB6 948 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 CTAGE9A4FU28 777 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 CTIFO43310 598 aaKnown RBP10.82□□□□□ -0.68
PHF3-208ENST00000506783 TCERG1LQ5VWI1 586 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 IFT81Q8WYA0 676 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 ZSCAN10Q96SZ4 725 aaPredicted RBP10.82□□□□□ -0.68
PHF3-208ENST00000506783 ISCA1Q9BUE6 129 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 BCCIPQ9P287 314 aaKnown RBP eCLIP10.82□□□□□ -0.68
PHF3-208ENST00000506783 ZNF185O15231 689 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 TCP10Q12799 353 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 KRT27Q7Z3Y8 459 aa10.82□□□□□ -0.68
PHF3-208ENST00000506783 AKR1B10O60218 316 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 TBC1D8BQ0IIM8 1120 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 SOGA3Q5TF21 947 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 CCDC181Q5TID7 509 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 LRRC47Q8N1G4 583 aaKnown RBP10.81□□□□□ -0.68
PHF3-208ENST00000506783 PAGE5Q96GU1 130 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 CNNM2Q9H8M5 875 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 INTS13Q9NVM9 706 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 ZNHIT6Q9NWK9 470 aaKnown RBP10.81□□□□□ -0.68
PHF3-208ENST00000506783 EHD2Q9NZN4 543 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 CTAGE15A4D2H0 777 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 CTAGE8P0CG41 777 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 RESP18Q5W5W9 173 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 SARM1Q6SZW1 724 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 CTAGE6Q86UF2 777 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 CTAGE4Q8IX94 777 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 GOLGA1Q92805 767 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 NEURL4Q96JN8 1562 aa10.81□□□□□ -0.68
PHF3-208ENST00000506783 KIF2AO00139 706 aaPredicted RBP10.81□□□□□ -0.68
PHF3-208ENST00000506783 ZEB2O60315 1214 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms