RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 TMA7Q9Y2S6 64 aaKnown RBP8.83□□□□□ -1
HERC4-213ENST00000506515 ITGB2P05107 769 aa8.82□□□□□ -1
HERC4-213ENST00000506515 MTERF2Q49AM1 385 aa8.82□□□□□ -1
HERC4-213ENST00000506515 AXDND1Q5T1B0 1012 aaPredicted RBP8.82□□□□□ -1
HERC4-213ENST00000506515 DCAF15Q66K64 600 aa8.82□□□□□ -1
HERC4-213ENST00000506515 ZAR1Q86SH2 424 aa8.82□□□□□ -1
HERC4-213ENST00000506515 SHISA5Q8N114 240 aa8.82□□□□□ -1
HERC4-213ENST00000506515 TMEM151AQ8N4L1 468 aa8.82□□□□□ -1
HERC4-213ENST00000506515 CNTNAP4Q9C0A0 1308 aa8.81□□□□□ -1
HERC4-213ENST00000506515 TLDC2A0PJX2 215 aa8.81□□□□□ -1
HERC4-213ENST00000506515 CYP7A1P22680 504 aa8.81□□□□□ -1
HERC4-213ENST00000506515 RNF4P78317 190 aa8.81□□□□□ -1
HERC4-213ENST00000506515 OGFOD3Q6PK18 319 aa8.81□□□□□ -1
HERC4-213ENST00000506515 RNF141Q8WVD5 230 aa8.81□□□□□ -1
HERC4-213ENST00000506515 GATA6Q92908 595 aa8.81□□□□□ -1
HERC4-213ENST00000506515 SMARCC1Q92922 1105 aaPredicted RBP8.81□□□□□ -1
HERC4-213ENST00000506515 PFDN2Q9UHV9 154 aa8.81□□□□□ -1
HERC4-213ENST00000506515 FAM170BA6NMN3 283 aa8.8□□□□□ -1
HERC4-213ENST00000506515 SUSD5O60279 629 aa8.8□□□□□ -1
HERC4-213ENST00000506515 LRRN2O75325 713 aa8.8□□□□□ -1
HERC4-213ENST00000506515 DOC2BQ14184 412 aa8.8□□□□□ -1
HERC4-213ENST00000506515 HEATR6Q6AI08 1181 aaKnown RBP8.8□□□□□ -1
HERC4-213ENST00000506515 SPATC1Q76KD6 591 aa8.8□□□□□ -1
HERC4-213ENST00000506515 JAZF1Q86VZ6 243 aa8.8□□□□□ -1
HERC4-213ENST00000506515 VWCEQ96DN2 955 aa8.8□□□□□ -1
HERC4-213ENST00000506515 HAUS7Q99871 368 aa8.8□□□□□ -1
HERC4-213ENST00000506515 PRDM5Q9NQX1 630 aaPredicted RBP8.8□□□□□ -1
HERC4-213ENST00000506515 MRPL42Q9Y6G3 142 aaKnown RBP8.8□□□□□ -1
HERC4-213ENST00000506515 COL17A1Q9UMD9 1497 aaPredicted RBP8.8□□□□□ -1
HERC4-213ENST00000506515 CBX7O95931 251 aa8.79□□□□□ -1
HERC4-213ENST00000506515 EPHX1P07099 455 aa8.79□□□□□ -1
HERC4-213ENST00000506515 SFRP5Q5T4F7 317 aa8.79□□□□□ -1
HERC4-213ENST00000506515 ZNF765Q7L2R6 523 aa8.79□□□□□ -1
HERC4-213ENST00000506515 ST13P5Q8NFI4 369 aaPredicted RBP8.79□□□□□ -1
HERC4-213ENST00000506515 FGD4Q96M96 766 aa8.79□□□□□ -1
HERC4-213ENST00000506515 ASPNQ9BXN1 380 aa8.79□□□□□ -1
HERC4-213ENST00000506515 FBXL21Q9UKT6 434 aa8.79□□□□□ -1
HERC4-213ENST00000506515 TBX22Q9Y458 520 aa8.79□□□□□ -1
HERC4-213ENST00000506515 AUHQ13825 339 aaKnown RBP8.78□□□□□ -1
HERC4-213ENST00000506515 SV2CQ496J9 727 aa8.78□□□□□ -1
HERC4-213ENST00000506515 CYP27C1Q4G0S4 372 aa8.78□□□□□ -1
HERC4-213ENST00000506515 RNF43Q68DV7 783 aa8.78□□□□□ -1
HERC4-213ENST00000506515 ADAT2Q7Z6V5 191 aaKnown RBP8.78□□□□□ -1
HERC4-213ENST00000506515 LILRB2Q8N423 598 aa8.78□□□□□ -1
HERC4-213ENST00000506515 PPP1R14AQ96A00 147 aa8.78□□□□□ -1
HERC4-213ENST00000506515 FBXL18Q96ME1 805 aa8.78□□□□□ -1
HERC4-213ENST00000506515 GTF2IRD1Q9UHL9 959 aa8.78□□□□□ -1
HERC4-213ENST00000506515 ZNF451Q9Y4E5 1061 aa8.78□□□□□ -1
HERC4-213ENST00000506515 ANKRD34BA5PLL1 514 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 CBFA2T2O43439 604 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 F13BP05160 661 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 SSRP1Q08945 709 aaKnown RBP8.77□□□□□ -1.01
HERC4-213ENST00000506515 NFIAQ12857 509 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 TCEAL1Q15170 157 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 SLC10A6Q3KNW5 377 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 FAM214BQ7L5A3 538 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 C7orf61Q8IZ16 206 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 FAM177A1Q8N128 213 aaPredicted RBP8.77□□□□□ -1.01
HERC4-213ENST00000506515 HEXIM2Q96MH2 286 aaKnown RBP8.77□□□□□ -1.01
HERC4-213ENST00000506515 APBA2Q99767 749 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 SUSD2Q9UGT4 822 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 ZMYM5Q9UJ78 669 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 KDM2BQ8NHM5 1336 aa8.77□□□□□ -1.01
HERC4-213ENST00000506515 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
HERC4-213ENST00000506515 NAT2P11245 290 aa8.76□□□□□ -1.01
HERC4-213ENST00000506515 CD247P20963 164 aa8.76□□□□□ -1.01
HERC4-213ENST00000506515 CYP27A1Q02318 531 aa8.76□□□□□ -1.01
HERC4-213ENST00000506515 NBPF9Q3BBW0 867 aa8.76□□□□□ -1.01
HERC4-213ENST00000506515 DUSP27Q5VZP5 1158 aa8.76□□□□□ -1.01
HERC4-213ENST00000506515 RNPC3Q96LT9 517 aaKnown RBP8.76□□□□□ -1.01
HERC4-213ENST00000506515 KLHL25Q9H0H3 589 aa8.76□□□□□ -1.01
HERC4-213ENST00000506515 SUGT1Q9Y2Z0 365 aa8.76□□□□□ -1.01
HERC4-213ENST00000506515 PCDHB12Q9Y5F1 795 aa8.76□□□□□ -1.01
HERC4-213ENST00000506515 PRR33A8MZF0 331 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 WDR64B1ANS9 1081 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 SHOXO15266 292 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 ZNF143P52747 638 aaPredicted RBP8.75□□□□□ -1.01
HERC4-213ENST00000506515 SNW1Q13573 536 aaKnown RBP8.75□□□□□ -1.01
HERC4-213ENST00000506515 ANKRD39Q53RE8 183 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 SDE2Q6IQ49 451 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 NLGN1Q8N2Q7 840 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 SH3TC2Q8TF17 1288 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 COX4I2Q96KJ9 171 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 Q96M66 194 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 DBNDD2Q9BQY9 259 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 PRDM14Q9GZV8 571 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 GBP3Q9H0R5 595 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 EPN3Q9H201 632 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 KANSL2Q9H9L4 492 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 LRP2BPQ9P2M1 347 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 APEX2Q9UBZ4 518 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 KCNH3Q9ULD8 1083 aa8.75□□□□□ -1.01
HERC4-213ENST00000506515 AGRPO00253 132 aa8.74□□□□□ -1.01
HERC4-213ENST00000506515 NOL9Q5SY16 702 aaKnown RBP8.74□□□□□ -1.01
HERC4-213ENST00000506515 ARHGAP27Q6ZUM4 889 aa8.74□□□□□ -1.01
HERC4-213ENST00000506515 DTWD2Q8NBA8 298 aa8.74□□□□□ -1.01
HERC4-213ENST00000506515 ADCY4Q8NFM4 1077 aa8.74□□□□□ -1.01
HERC4-213ENST00000506515 SHKBP1Q8TBC3 707 aa8.74□□□□□ -1.01
HERC4-213ENST00000506515 BRF1Q92994 677 aa8.74□□□□□ -1.01
HERC4-213ENST00000506515 OSBPL1AQ9BXW6 950 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms