RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 TMTC3Q6ZXV5 915 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 NSUN4Q96CB9 384 aaKnown RBP8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 GSDMAQ96QA5 445 aa8.66□□□□□ -1.02
PPARGC1A-204ENST00000506055 BCL9LQ86UU0 1499 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 DOT1LQ8TEK3 1739 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 GOLGA6L9A6NEM1 432 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 EFCAB8A8MWE9 144 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 PPP1R3GB7ZBB8 358 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 CYP2D6P10635 497 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 CDC25AP30304 524 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 GABPB1Q06547 395 aaPredicted RBP8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 APTXQ7Z2E3 356 aaKnown RBP8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 SH3RF1Q7Z6J0 888 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 MRPL44Q9H9J2 332 aaKnown RBP8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 DCP1AQ9NPI6 582 aaPredicted RBP8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 FAM53CQ9NYF3 392 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 CTNND2Q9UQB3 1225 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 FHOD1Q9Y613 1164 aa8.65□□□□□ -1.02
PPARGC1A-204ENST00000506055 NHSL1Q5SYE7 1610 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 CICQ96RK0 1608 aaPredicted RBP8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 SPATA31A1Q5TZJ5 1347 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 A0A0U1RQJ8 604 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 TSPY2A6NKD2 308 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 TADA3O75528 432 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 DDAH1O94760 285 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 KIF20AO95235 890 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 BMP15O95972 392 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 CCDC175P0C221 793 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 SCG2P13521 617 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 PRDX5P30044 214 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 CASP14P31944 242 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 MAP3K9P80192 1104 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 SF3B3Q15393 1217 aaKnown RBP8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 TERF2Q15554 542 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 FILIP1LQ4L180 1135 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 RRAGBQ5VZM2 374 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 TMCO3Q6UWJ1 677 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 IQUBQ8NA54 791 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 CCDC12Q8WUD4 166 aaPredicted RBP8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 ATRIPQ8WXE1 791 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 TNFRSF25Q93038 417 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 CRNKL1Q9BZJ0 848 aaKnown RBP8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 ARGLU1Q9NWB6 273 aaPredicted RBP8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 ADD3Q9UEY8 706 aaKnown RBP8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 MAPK8IP1Q9UQF2 711 aa8.65□□□□□ -1.03
PPARGC1A-204ENST00000506055 MYH2Q9UKX2 1941 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 TAF1P21675 1872 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 COL14A1Q05707 1796 aaKnown RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 BAZ2AQ9UIF9 1905 aaKnown RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 SEC31AO94979 1220 aaKnown RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 FGRP09769 529 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 HIBADHP31937 336 aaKnown RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 ATP2C1P98194 919 aaPredicted RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 IL17AQ16552 155 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 CLEC4GQ6UXB4 293 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 PANX2Q96RD6 677 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 CTAGE1Q96RT6 745 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 ZSWIM4Q9H7M6 989 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 MTMR7Q9Y216 660 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 CNTNAP5Q8WYK1 1306 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 PLCH1Q4KWH8 1693 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 PNMA6AP0CW24 399 aaPredicted RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 PCP11498 1178 aaKnown RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 RPS8P62241 208 aaKnown RBP8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 PPP2R3AQ06190 1150 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 TEX35Q5T0J7 233 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 CDKAL1Q5VV42 579 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 TBC1D9BQ66K14 1250 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 RAD9BQ6WBX8 426 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 FBXO33Q7Z6M2 555 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 KIFC2Q96AC6 838 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 VPS16Q9H269 839 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 MCM9Q9NXL9 1143 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 MRFAP1Q9Y605 127 aa8.64□□□□□ -1.03
PPARGC1A-204ENST00000506055 DUOX1Q9NRD9 1551 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 XDHP47989 1333 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 MYH14Q7Z406 1995 aaKnown RBP8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 MYH6P13533 1939 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 N4BP3O15049 544 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 USP17L8P0C7I0 530 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 CT47A1Q5JQC4 288 aaPredicted RBP8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 LINC00116Q8NCU8 138 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 MTRQ99707 1265 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 ADGRG1Q9Y653 693 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 PHLPP1O60346 1717 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 BAZ2BQ9UIF8 2168 aaKnown RBP8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 TPM1P09493 284 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 FXR1P51114 621 aaKnown RBP eCLIP8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 TFAP4Q01664 338 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 E2F4Q16254 413 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 PFKFB3Q16875 520 aaPredicted RBP8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 RASGRP4Q8TDF6 673 aa8.63□□□□□ -1.03
PPARGC1A-204ENST00000506055 KAT14Q9H8E8 782 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms