RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 USP17L19D6RCP7 530 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP17L20D6RJB6 530 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 HIP1O00291 1037 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 MSCO60682 206 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 CYP2E1P05181 493 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-206ENST00000505957 HOXC6P09630 235 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP14P54578 494 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP17L24Q0WX57 530 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 BECN1Q14457 450 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 SHROOM1Q2M3G4 852 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-206ENST00000505957 MFSD14CQ5VZR4 134 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 TATDN1Q6P1N9 297 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 LBX2Q6XYB7 198 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 CERS3Q8IU89 383 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP26Q9BXU7 913 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 SNRKQ9NRH2 765 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 DBNLQ9UJU6 430 aaKnown RBP12.82□□□□□ -0.36
CPNE4-206ENST00000505957 SIPA1L1O43166 1804 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 CNMDO75829 334 aa12.81□□□□□ -0.36
CPNE4-206ENST00000505957 GH2P01242 217 aa12.81□□□□□ -0.36
CPNE4-206ENST00000505957 PTPREP23469 700 aa12.81□□□□□ -0.36
CPNE4-206ENST00000505957 CATSPERGQ6ZRH7 1159 aa12.81□□□□□ -0.36
CPNE4-206ENST00000505957 LPAR1Q92633 364 aa12.81□□□□□ -0.36
CPNE4-206ENST00000505957 CCDC8Q9H0W5 538 aaPredicted RBP12.81□□□□□ -0.36
CPNE4-206ENST00000505957 EHD4Q9H223 541 aa12.81□□□□□ -0.36
CPNE4-206ENST00000505957 CWC22Q9HCG8 908 aaKnown RBP12.81□□□□□ -0.36
CPNE4-206ENST00000505957 DDX20Q9UHI6 824 aaKnown RBP12.81□□□□□ -0.36
CPNE4-206ENST00000505957 RAD50Q92878 1312 aa12.81□□□□□ -0.36
CPNE4-206ENST00000505957 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
CPNE4-206ENST00000505957 IGHA2P01877 340 aa12.8□□□□□ -0.36
CPNE4-206ENST00000505957 GRB14Q14449 540 aa12.8□□□□□ -0.36
CPNE4-206ENST00000505957 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
CPNE4-206ENST00000505957 SNX21Q969T3 373 aa12.8□□□□□ -0.36
CPNE4-206ENST00000505957 RILPL2Q969X0 211 aa12.8□□□□□ -0.36
CPNE4-206ENST00000505957 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
CPNE4-206ENST00000505957 DBNDD2Q9BQY9 259 aa12.8□□□□□ -0.36
CPNE4-206ENST00000505957 SENP6Q9GZR1 1112 aaPredicted RBP12.8□□□□□ -0.36
CPNE4-206ENST00000505957 KIAA1683Q9H0B3 1180 aa12.8□□□□□ -0.36
CPNE4-206ENST00000505957 TLR7Q9NYK1 1049 aaKnown RBP12.8□□□□□ -0.36
CPNE4-206ENST00000505957 FLRT1Q9NZU1 646 aa12.8□□□□□ -0.36
CPNE4-206ENST00000505957 DNM1LO00429 736 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 SGSM2O43147 1006 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 ZAP70P43403 619 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 ATP2B2Q01814 1243 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
CPNE4-206ENST00000505957 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 GUCD1Q96NT3 240 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 KIF2CQ99661 725 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 FEZ1Q99689 392 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 HAUS7Q99871 368 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 COL25A1Q9BXS0 654 aaPredicted RBP12.79□□□□□ -0.36
CPNE4-206ENST00000505957 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
CPNE4-206ENST00000505957 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 IVNS1ABPQ9Y6Y0 642 aa12.79□□□□□ -0.36
CPNE4-206ENST00000505957 VCAM1P19320 739 aa12.78□□□□□ -0.36
CPNE4-206ENST00000505957 CYP7A1P22680 504 aa12.78□□□□□ -0.36
CPNE4-206ENST00000505957 ANAPC15P60006 121 aa12.78□□□□□ -0.36
CPNE4-206ENST00000505957 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
CPNE4-206ENST00000505957 CERKLQ49MI3 558 aaPredicted RBP12.78□□□□□ -0.36
CPNE4-206ENST00000505957 TTC6Q86TZ1 520 aa12.78□□□□□ -0.36
CPNE4-206ENST00000505957 BCL11AQ9H165 835 aa12.78□□□□□ -0.36
CPNE4-206ENST00000505957 PIH1D3Q9NQM4 214 aaKnown RBP12.78□□□□□ -0.36
CPNE4-206ENST00000505957 PRKAG2Q9UGJ0 569 aa12.78□□□□□ -0.36
CPNE4-206ENST00000505957 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
CPNE4-206ENST00000505957 RAB3GAP1Q15042 981 aa12.77□□□□□ -0.37
CPNE4-206ENST00000505957 RABEP1Q15276 862 aa12.77□□□□□ -0.37
CPNE4-206ENST00000505957 ZYXQ15942 572 aaKnown RBP12.77□□□□□ -0.37
CPNE4-206ENST00000505957 ABCB5Q2M3G0 1257 aa12.77□□□□□ -0.37
CPNE4-206ENST00000505957 OLFML2BQ68BL8 750 aa12.77□□□□□ -0.37
CPNE4-206ENST00000505957 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
CPNE4-206ENST00000505957 NPLOC4Q8TAT6 608 aa12.77□□□□□ -0.37
CPNE4-206ENST00000505957 CABP5Q9NP86 173 aa12.77□□□□□ -0.37
CPNE4-206ENST00000505957 BTBD7Q9P203 1132 aa12.77□□□□□ -0.37
CPNE4-206ENST00000505957 CDK5RAP2Q96SN8 1893 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
CPNE4-206ENST00000505957 STRNO43815 780 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 CYBAP13498 195 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 MCCP23508 829 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 CNGA1P29973 690 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 CYP2C19P33261 490 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 USP5P45974 858 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 ATN1P54259 1190 aaPredicted RBP12.76□□□□□ -0.37
CPNE4-206ENST00000505957 RTP1P59025 263 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 ZNF697Q5TEC3 545 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 TRPV1Q8NER1 839 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 DIAPH3Q9NSV4 1193 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 HOXC10Q9NYD6 342 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
CPNE4-206ENST00000505957 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
CPNE4-206ENST00000505957 SHMT1P34896 483 aa12.75□□□□□ -0.37
CPNE4-206ENST00000505957 COG2Q14746 738 aa12.75□□□□□ -0.37
CPNE4-206ENST00000505957 SNX17Q15036 470 aa12.75□□□□□ -0.37
CPNE4-206ENST00000505957 SLC39A5Q6ZMH5 540 aa12.75□□□□□ -0.37
CPNE4-206ENST00000505957 DPP9Q86TI2 863 aa12.75□□□□□ -0.37
CPNE4-206ENST00000505957 MIGA1Q8NAN2 632 aa12.75□□□□□ -0.37
CPNE4-206ENST00000505957 SHCBP1Q8NEM2 672 aa12.75□□□□□ -0.37
CPNE4-206ENST00000505957 BOLA2Q9H3K6 86 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms