RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 SART3Q15020 963 aaKnown RBP13.47□□□□□ -0.25
UBE3D-206ENST00000505226 IL17AQ16552 155 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 GSDMAQ96QA5 445 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 CHP1Q99653 195 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 ABHD10Q9NUJ1 306 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 TFR2Q9UP52 801 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
UBE3D-206ENST00000505226 V9GY48 417 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-206ENST00000505226 STRCP1A6NGW2 1772 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 BCORQ6W2J9 1755 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 PPARAQ07869 468 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 E2F4Q16254 413 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 NCAPH2Q6IBW4 605 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 FOXR1Q6PIV2 292 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 TNFRSF25Q93038 417 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 RNF26Q9BY78 433 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-206ENST00000505226 PSD3Q9NYI0 1048 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 ZBTB1Q9Y2K1 713 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 CYP2D7A0A087X1C5 515 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 CCDC196A0A1B0GTZ2 297 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 LRRC10BA6NIK2 292 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 MINDY4BA8MYZ0 360 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 VEGFAP15692 232 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-206ENST00000505226 AMPD2Q01433 879 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 GPS2Q13227 327 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 HDXQ7Z353 690 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 ENAHQ8N8S7 591 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-206ENST00000505226 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-206ENST00000505226 SLF1Q9BQI6 1058 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 FAN1Q9Y2M0 1017 aa13.47□□□□□ -0.25
UBE3D-206ENST00000505226 PNPLA7Q6ZV29 1317 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 BAZ2BQ9UIF8 2168 aaKnown RBP13.46□□□□□ -0.25
UBE3D-206ENST00000505226 ERICH2A1L162 156 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 WTIPA6NIX2 430 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-206ENST00000505226 STARD3NLO95772 234 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 EVX2Q03828 476 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 CNGA4Q8IV77 575 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 CARD10Q9BWT7 1032 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 TAB2Q9NYJ8 693 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 IQSEC3Q9UPP2 1182 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-206ENST00000505226 MAPK8IP1Q9UQF2 711 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 ITIH6Q6UXX5 1313 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 LRRIQ3A6PVS8 624 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-206ENST00000505226 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-206ENST00000505226 PTGDRQ13258 359 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 CT47A1Q5JQC4 288 aaPredicted RBP13.46□□□□□ -0.25
UBE3D-206ENST00000505226 CTAGE1Q96RT6 745 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 UBAC1Q9BSL1 405 aa13.46□□□□□ -0.25
UBE3D-206ENST00000505226 LIMA1Q9UHB6 759 aaKnown RBP13.46□□□□□ -0.25
UBE3D-206ENST00000505226 MROH5Q6ZUA9 1318 aa13.46□□□□□ -0.26
UBE3D-206ENST00000505226 SEMA3EO15041 775 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 N4BP3O15049 544 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 KRT2P35908 639 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 SLC20A2Q08357 652 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 TMTC2Q8N394 836 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 ARAP2Q8WZ64 1704 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 CASP8Q14790 479 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 PDXDC2PQ6P474 469 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 GOLGA5Q8TBA6 731 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 NAPGQ99747 312 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-206ENST00000505226 NACAP1Q9BZK3 213 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 TTF2Q9UNY4 1162 aaKnown RBP13.45□□□□□ -0.26
UBE3D-206ENST00000505226 LRP5O75197 1615 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 MYH2Q9UKX2 1941 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 PHACTR2O75167 634 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 SLC5A1P13866 664 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 COPB1P53618 953 aaKnown RBP13.45□□□□□ -0.26
UBE3D-206ENST00000505226 RRAGBQ5VZM2 374 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 IRF2BP1Q8IU81 584 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 AK7Q96M32 723 aa13.45□□□□□ -0.26
UBE3D-206ENST00000505226 NUP98P52948 1817 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 ACTN2P35609 894 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 FILIP1LQ4L180 1135 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 TMTC1Q8IUR5 882 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 ENC1O14682 589 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 PRPF3O43395 683 aaKnown RBP13.44□□□□□ -0.26
UBE3D-206ENST00000505226 RCAN1P53805 252 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 TCP11X2Q5H9J9 407 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 FERMT2Q96AC1 680 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 CCDC51Q96ER9 411 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 NUP88Q99567 741 aaPredicted RBP13.44□□□□□ -0.26
UBE3D-206ENST00000505226 TRIM34Q9BYJ4 488 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 GDAQ9Y2T3 454 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
UBE3D-206ENST00000505226 CTAGE15A4D2H0 777 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 MYO1CO00159 1063 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 CTAGE8P0CG41 777 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 GNAT2P19087 354 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 KRT9P35527 623 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 ATP2C1P98194 919 aaPredicted RBP13.44□□□□□ -0.26
UBE3D-206ENST00000505226 TROAPQ12815 778 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 TTC38Q5R3I4 469 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 CTAGE6Q86UF2 777 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 CTAGE4Q8IX94 777 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
UBE3D-206ENST00000505226 CYP26C1Q6V0L0 522 aa13.43□□□□□ -0.26
UBE3D-206ENST00000505226 ZSCAN10Q96SZ4 725 aaPredicted RBP13.43□□□□□ -0.26
UBE3D-206ENST00000505226 LRP2BPQ9P2M1 347 aa13.43□□□□□ -0.26
UBE3D-206ENST00000505226 ANKRD36CQ5JPF3 1778 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms