RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 SAFBQ15424 915 aaKnown RBP eCLIP13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 C9orf131Q5VYM1 1079 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 FERMT3Q86UX7 667 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 MKL1Q969V6 931 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 TMEM39BQ9GZU3 492 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 MAD2L2Q9UI95 211 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 HACL1Q9UJ83 578 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 PITPNM2Q9BZ72 1349 aa13.83□□□□□ -0.2
POLR2J3-210ENST00000504677 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 PPFIA3O75145 1194 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 SNHG28P0DPA3 235 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 GPR162Q16538 588 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 KRT40Q6A162 431 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 ZNF396Q96N95 335 aaPredicted RBP13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 SPZ1Q9BXG8 430 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 SCAND2PQ9GZW5 306 aaPredicted RBP13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 CLIP2Q9UDT6 1046 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 PGAP2Q9UHJ9 254 aa13.82□□□□□ -0.2
POLR2J3-210ENST00000504677 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 EGFRP00533 1210 aa13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 PDHBP11177 359 aa13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 NCLP19338 710 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 FOSBP53539 338 aa13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 GNL2Q13823 731 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 GPATCH4Q5T3I0 446 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 DCAF15Q66K64 600 aa13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 LRRC47Q8N1G4 583 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 DCAF4Q8WV16 495 aa13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 SH2D4AQ9H788 454 aa13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 BRMS1Q9HCU9 246 aa13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 ADARB2Q9NS39 739 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 CFAP45Q9UL16 551 aa13.81□□□□□ -0.2
POLR2J3-210ENST00000504677 ATAD5Q96QE3 1844 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 KLRF2D3W0D1 207 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 hCG_1984214I3L0E3 225 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 GDF11O95390 407 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 MBD3O95983 291 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 GH2P01242 217 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 MMP1P03956 469 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 SCG2P13521 617 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 EEF2P13639 858 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 GUCY1B3Q02153 619 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 KIF23Q02241 960 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 DNM1Q05193 864 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 SEPT2Q15019 361 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 PFKFB3Q16875 520 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 CMTR1Q8N1G2 835 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 CCDC82Q8N4S0 544 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 ZNF713Q8N859 430 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 GMCL1P1Q8NEA9 526 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 TEPSINQ96N21 525 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 ARHGEF10LQ9HCE6 1279 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 SH3GLB2Q9NR46 395 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 LMBRD1Q9NUN5 540 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 ZBTB21Q9ULJ3 1066 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 V9GY48 417 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 ELP1O95163 1332 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 TCHHQ07283 1943 aa13.8□□□□□ -0.2
POLR2J3-210ENST00000504677 TRAK2O60296 914 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 DDNO94850 711 aaPredicted RBP13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 ASNSP08243 561 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 GUCY1A2P33402 732 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 CAP2P40123 477 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 ATP2B2Q01814 1243 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 ZNF543Q08ER8 600 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 PKN1Q16512 942 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 ANGEL2Q5VTE6 544 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 CCDC148Q8NFR7 591 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 CCDC12Q8WUD4 166 aaPredicted RBP13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 AIFM3Q96NN9 605 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 FOXP1Q9H334 677 aaPredicted RBP13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 CNPY2Q9Y2B0 182 aa13.79□□□□□ -0.2
POLR2J3-210ENST00000504677 SCN4AP35499 1836 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 USP17L5A8MUK1 530 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 FIBPO43427 364 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 PRPF40AO75400 957 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 U2AF2P26368 475 aaKnown RBP eCLIP13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 CALML3P27482 149 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 EPS15P42566 896 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 CCDC96Q2M329 555 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 FOXD4L6Q3SYB3 417 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 GALNT17Q6IS24 598 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 USP17L2Q6R6M4 530 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 FOXD4L3Q6VB84 417 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 CLEC10AQ8IUN9 316 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 RRP36Q96EU6 259 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 GMCL1Q96IK5 515 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 ZNF341Q9BYN7 854 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 GGA3Q9NZ52 723 aa13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 SEC63Q9UGP8 760 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-210ENST00000504677 MTMR7Q9Y216 660 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms