RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 USP17L2Q6R6M4 530 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 GADL1Q6ZQY3 521 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 RUFY3Q7L099 469 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 PRRT2Q7Z6L0 340 aaPredicted RBP16.39■□□□□ 0.21
DDR1-253ENST00000504651 DGKHQ86XP1 1220 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 SIAH1Q8IUQ4 282 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 IL17RAQ96F46 866 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 TTC14Q96N46 770 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 TMOD4Q9NZQ9 345 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 SYNPO2Q9UMS6 1093 aa16.39■□□□□ 0.21
DDR1-253ENST00000504651 CCL15-CCL14A0A0B4J2E2 113 aa16.38■□□□□ 0.21
DDR1-253ENST00000504651 MANSC4A6NHS7 340 aaPredicted RBP16.38■□□□□ 0.21
DDR1-253ENST00000504651 CETPP11597 493 aa16.38■□□□□ 0.21
DDR1-253ENST00000504651 DGKZQ13574 1117 aa16.38■□□□□ 0.21
DDR1-253ENST00000504651 CCL15Q16663 113 aa16.38■□□□□ 0.21
DDR1-253ENST00000504651 SH3D19Q5HYK7 790 aa16.38■□□□□ 0.21
DDR1-253ENST00000504651 TMEM47Q9BQJ4 181 aa16.38■□□□□ 0.21
DDR1-253ENST00000504651 VCPKMTQ9H867 229 aa16.38■□□□□ 0.21
DDR1-253ENST00000504651 MTMR7Q9Y216 660 aa16.38■□□□□ 0.21
DDR1-253ENST00000504651 WDR33Q9C0J8 1336 aaKnown RBP16.38■□□□□ 0.21
DDR1-253ENST00000504651 AOC2O75106 756 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 VEGFBP49765 207 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
DDR1-253ENST00000504651 SREBF2Q12772 1141 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 NFXL1Q6ZNB6 911 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 PROCA1Q8NCQ7 364 aaPredicted RBP16.37■□□□□ 0.21
DDR1-253ENST00000504651 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 GMCL1P1Q8NEA9 526 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 IGDCC4Q8TDY8 1250 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 MKL1Q969V6 931 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 C12orf42Q96LP6 360 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
DDR1-253ENST00000504651 GPHNQ9NQX3 736 aaPredicted RBP16.37■□□□□ 0.21
DDR1-253ENST00000504651 CCDC69A6NI79 296 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 KIF23Q02241 960 aaPredicted RBP16.36■□□□□ 0.21
DDR1-253ENST00000504651 Q6ZUG5 572 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 FASTKD5Q7L8L6 764 aaKnown RBP16.36■□□□□ 0.21
DDR1-253ENST00000504651 SPICE1Q8N0Z3 855 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 ANKS1AQ92625 1134 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 LPAR1Q92633 364 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 MS4A4AQ96JQ5 239 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 SENP2Q9HC62 589 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 EMILIN3Q9NT22 766 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 PDRG1Q9NUG6 133 aa16.36■□□□□ 0.21
DDR1-253ENST00000504651 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 F5H6K3 240 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 NDUFB10O96000 172 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 VCAM1P19320 739 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 LIFRP42702 1097 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 KLRC3Q07444 240 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 SLFN13Q68D06 897 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 TMTC2Q8N394 836 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 BRI3BPQ8WY22 251 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 KIF2CQ99661 725 aa16.35■□□□□ 0.21
DDR1-253ENST00000504651 ISY1Q9ULR0 285 aaKnown RBP16.35■□□□□ 0.21
DDR1-253ENST00000504651 WDR46O15213 610 aaKnown RBP16.34■□□□□ 0.21
DDR1-253ENST00000504651 NEK4P51957 841 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 MOGSQ13724 837 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 RABEP1Q15276 862 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 CCDC96Q2M329 555 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 KIAA1755Q5JYT7 1200 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 RASGRP2Q7LDG7 609 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 CATIPQ7Z7H3 387 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 BRF1Q92994 677 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 ZIC5Q96T25 663 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 AGTPBP1Q9UPW5 1226 aa16.34■□□□□ 0.21
DDR1-253ENST00000504651 TESPA1A2RU30 521 aaPredicted RBP16.33■□□□□ 0.2
DDR1-253ENST00000504651 MAP2K2P36507 400 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 INHBEP58166 350 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 PABPC4Q13310 644 aaKnown RBP eCLIP16.33■□□□□ 0.2
DDR1-253ENST00000504651 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 TREML2Q5T2D2 321 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 ANKRD23Q86SG2 305 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 SGMS1Q86VZ5 419 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 ZNF654Q8IZM8 581 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 GMCL1Q96IK5 515 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 NUP88Q99567 741 aaPredicted RBP16.33■□□□□ 0.2
DDR1-253ENST00000504651 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 RPAP3Q9H6T3 665 aaPredicted RBP16.33■□□□□ 0.2
DDR1-253ENST00000504651 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.2
DDR1-253ENST00000504651 SLC12A7Q9Y666 1083 aa16.33■□□□□ 0.2
DDR1-253ENST00000504651 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 BTBD19C9JJ37 291 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 DDAH1O94760 285 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 PDHBP11177 359 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 BMP3P12645 472 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 SLC1A4P43007 532 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 APOBRQ0VD83 1088 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 TOB2Q14106 344 aaPredicted RBP16.32■□□□□ 0.2
DDR1-253ENST00000504651 FRMPD2Q68DX3 1309 aaPredicted RBP16.32■□□□□ 0.2
DDR1-253ENST00000504651 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 SYNE3Q6ZMZ3 975 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
DDR1-253ENST00000504651 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 NUP133Q8WUM0 1156 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms