RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
TRIO-206ENST00000504606 MKL1Q969V6 931 aa13.25□□□□□ -0.29
TRIO-206ENST00000504606 CHMP4CQ96CF2 233 aa13.25□□□□□ -0.29
TRIO-206ENST00000504606 INTS4Q96HW7 963 aaKnown RBP13.25□□□□□ -0.29
TRIO-206ENST00000504606 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
TRIO-206ENST00000504606 PICK1Q9NRD5 415 aa13.25□□□□□ -0.29
TRIO-206ENST00000504606 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
TRIO-206ENST00000504606 USP17L5A8MUK1 530 aa13.24□□□□□ -0.29
TRIO-206ENST00000504606 CPLX1O14810 134 aa13.24□□□□□ -0.29
TRIO-206ENST00000504606 DTNBO60941 627 aa13.24□□□□□ -0.29
TRIO-206ENST00000504606 ADD1P35611 737 aaKnown RBP13.24□□□□□ -0.29
TRIO-206ENST00000504606 GRM4Q14833 912 aa13.24□□□□□ -0.29
TRIO-206ENST00000504606 NOL9Q5SY16 702 aaKnown RBP13.24□□□□□ -0.29
TRIO-206ENST00000504606 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
TRIO-206ENST00000504606 ARMC9Q7Z3E5 817 aa13.24□□□□□ -0.29
TRIO-206ENST00000504606 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
TRIO-206ENST00000504606 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
TRIO-206ENST00000504606 SMC3Q9UQE7 1217 aa13.24□□□□□ -0.29
TRIO-206ENST00000504606 OTOFQ9HC10 1997 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 PAPPA2Q9BXP8 1791 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 A0A1W2PRG0 241 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 RAD21O60216 631 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 KIF5BP33176 963 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 ECE1P42892 770 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 PPP2R5BQ15173 497 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.23□□□□□ -0.29
TRIO-206ENST00000504606 MOB2Q70IA6 237 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 RASGRP2Q7LDG7 609 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
TRIO-206ENST00000504606 ACER1Q8TDN7 264 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 MAP3K14Q99558 947 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 FEZ1Q99689 392 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 LLPHQ9BRT6 129 aaKnown RBP13.23□□□□□ -0.29
TRIO-206ENST00000504606 SH2D4AQ9H788 454 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 AS3MTQ9HBK9 375 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 FAM217BQ9NTX9 383 aaPredicted RBP13.23□□□□□ -0.29
TRIO-206ENST00000504606 TMX2Q9Y320 296 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 CSADQ9Y600 493 aa13.23□□□□□ -0.29
TRIO-206ENST00000504606 F5H6K3 240 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 KIF3CO14782 793 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 JAK2O60674 1132 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 CTDNEP1O95476 244 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 PARP1P09874 1014 aaKnown RBP13.22□□□□□ -0.29
TRIO-206ENST00000504606 PDHBP11177 359 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 PTPRAP18433 802 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 KLRC3Q07444 240 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 VGLL4Q14135 290 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 MAP3K11Q16584 847 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 CCDC96Q2M329 555 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 SLFN13Q68D06 897 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 USP17L2Q6R6M4 530 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 ANKRD13AQ8IZ07 590 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 SNCAIPQ9Y6H5 919 aa13.22□□□□□ -0.29
TRIO-206ENST00000504606 FRMPD2Q68DX3 1309 aaPredicted RBP13.21□□□□□ -0.29
TRIO-206ENST00000504606 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 PPFIA3O75145 1194 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 CDKL5O76039 1030 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 CELF2O95319 508 aaKnown RBP13.21□□□□□ -0.29
TRIO-206ENST00000504606 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 GOLGA8HP0CJ92 632 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 SNHG28P0DPA3 235 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 GJB2P29033 226 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 GNAQP50148 359 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
TRIO-206ENST00000504606 NTRK3Q16288 839 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 ASPRV1Q53RT3 343 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 TMTC3Q6ZXV5 915 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.29
TRIO-206ENST00000504606 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 CCDC82Q8N4S0 544 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 DCAF4Q8WV16 495 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 GBA2Q9HCG7 927 aaPredicted RBP13.21□□□□□ -0.29
TRIO-206ENST00000504606 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 ISY1Q9ULR0 285 aaKnown RBP13.21□□□□□ -0.29
TRIO-206ENST00000504606 ZHX2Q9Y6X8 837 aa13.21□□□□□ -0.29
TRIO-206ENST00000504606 PALM3A6NDB9 673 aaPredicted RBP13.2□□□□□ -0.3
TRIO-206ENST00000504606 UBE2Q2LH0YL09 131 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 ITGBL1O95965 494 aaPredicted RBP13.2□□□□□ -0.3
TRIO-206ENST00000504606 NDUFB10O96000 172 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 IFNAR1P17181 557 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 SLC1A4P43007 532 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 HMGN5P82970 282 aaKnown RBP13.2□□□□□ -0.3
TRIO-206ENST00000504606 ZNF543Q08ER8 600 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 SPP2Q13103 211 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 FAM184AQ8NB25 1140 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 ZNF280CQ8ND82 737 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 PHKBQ93100 1093 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 VCPKMTQ9H867 229 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 ELP3Q9H9T3 547 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 CWC22Q9HCG8 908 aaKnown RBP13.2□□□□□ -0.3
TRIO-206ENST00000504606 GPCPD1Q9NPB8 672 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
TRIO-206ENST00000504606 TRIM75PA6NK02 468 aa13.19□□□□□ -0.3
TRIO-206ENST00000504606 USP17L10C9JJH3 530 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms