RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 TRIB2Q92519 343 aa11.14□□□□□ -0.63
DHFR-202ENST00000504396 GDF15Q99988 308 aa11.14□□□□□ -0.63
DHFR-202ENST00000504396 UBE2OQ9C0C9 1292 aaKnown RBP11.14□□□□□ -0.63
DHFR-202ENST00000504396 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
DHFR-202ENST00000504396 MAST2Q6P0Q8 1798 aa11.13□□□□□ -0.63
DHFR-202ENST00000504396 BMP8BP34820 402 aa11.13□□□□□ -0.63
DHFR-202ENST00000504396 TDHQ8IZJ6 230 aa11.13□□□□□ -0.63
DHFR-202ENST00000504396 SH3RF3Q8TEJ3 882 aaPredicted RBP11.13□□□□□ -0.63
DHFR-202ENST00000504396 SOCS4Q8WXH5 440 aa11.13□□□□□ -0.63
DHFR-202ENST00000504396 NSUN4Q96CB9 384 aaKnown RBP11.13□□□□□ -0.63
DHFR-202ENST00000504396 NUDT12Q9BQG2 462 aa11.13□□□□□ -0.63
DHFR-202ENST00000504396 PAGR1Q9BTK6 254 aa11.13□□□□□ -0.63
DHFR-202ENST00000504396 HERC5Q9UII4 1024 aaKnown RBP11.13□□□□□ -0.63
DHFR-202ENST00000504396 PLXNB2O15031 1838 aa11.13□□□□□ -0.63
DHFR-202ENST00000504396 PEX10O60683 326 aa11.12□□□□□ -0.63
DHFR-202ENST00000504396 GNAI3P08754 354 aa11.12□□□□□ -0.63
DHFR-202ENST00000504396 MTX1Q13505 466 aa11.12□□□□□ -0.63
DHFR-202ENST00000504396 RRP1BQ14684 758 aaKnown RBP11.12□□□□□ -0.63
DHFR-202ENST00000504396 GPRC5AQ8NFJ5 357 aa11.12□□□□□ -0.63
DHFR-202ENST00000504396 ZNF384Q8TF68 577 aa11.12□□□□□ -0.63
DHFR-202ENST00000504396 AATFQ9NY61 560 aaKnown RBP eCLIP11.12□□□□□ -0.63
DHFR-202ENST00000504396 PI4KBQ9UBF8 816 aa11.12□□□□□ -0.63
DHFR-202ENST00000504396 GJD2Q9UKL4 321 aa11.12□□□□□ -0.63
DHFR-202ENST00000504396 IGSF3O75054 1194 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 GDF11O95390 407 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 BAG3O95817 575 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 ASNSP08243 561 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 CFHP08603 1231 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 BACE1P56817 501 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 HERVK_113P62684 666 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 WDR78Q5VTH9 848 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 NAA16Q6N069 864 aaPredicted RBP11.11□□□□□ -0.63
DHFR-202ENST00000504396 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 TRMT2AQ8IZ69 625 aaKnown RBP11.11□□□□□ -0.63
DHFR-202ENST00000504396 TGFBRAP1Q8WUH2 860 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 P2RX7Q99572 595 aaKnown RBP11.11□□□□□ -0.63
DHFR-202ENST00000504396 MORF4L1Q9UBU8 362 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 OGDHLQ9ULD0 1010 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 PFASO15067 1338 aa11.11□□□□□ -0.63
DHFR-202ENST00000504396 UQCRFS1P1P0C7P4 283 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 MAPK4P31152 587 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 RGS2P41220 211 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 MCAMP43121 646 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 COPS2P61201 443 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 MDM2Q00987 491 aaPredicted RBP11.1□□□□□ -0.63
DHFR-202ENST00000504396 G3BP1Q13283 466 aaKnown RBP eCLIP11.1□□□□□ -0.63
DHFR-202ENST00000504396 ZYXQ15942 572 aaKnown RBP11.1□□□□□ -0.63
DHFR-202ENST00000504396 TTC39AQ5SRH9 613 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
DHFR-202ENST00000504396 FEZ1Q99689 392 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 DHX36Q9H2U1 1008 aaKnown RBP11.1□□□□□ -0.63
DHFR-202ENST00000504396 IL21Q9HBE4 155 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 TXNRD2Q9NNW7 524 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 SNRKQ9NRH2 765 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
DHFR-202ENST00000504396 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 FOCADQ5VW36 1801 aa11.1□□□□□ -0.63
DHFR-202ENST00000504396 C19orf81C9J6K1 198 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 USP17L10C9JJH3 530 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 HLA-DOAP06340 250 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 ARID4AP29374 1257 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 CCND3P30281 292 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 ERVK-9P63128 1117 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 ERVK-24P63145 666 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 CACNB2Q08289 660 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 OS9Q13438 667 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 LRIT3Q3SXY7 679 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 ZNF516Q92618 1163 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 APBA2Q99767 749 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 GINM1Q9NU53 330 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 STXBP5LQ9Y2K9 1186 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 COL6A3P12111 3177 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 FLT1P17948 1338 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 XRCC5P13010 732 aaKnown RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 CNGA1P29973 690 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 HOXA7P31268 230 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 CCL14Q16627 93 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 LRRC26Q2I0M4 334 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 MAP3K21Q5TCX8 1036 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 GPR142Q7Z601 462 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 PLEKHH3Q7Z736 793 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 GTF3C2Q8WUA4 911 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 LBHD1Q9BQE6 289 aaPredicted RBP11.09□□□□□ -0.63
DHFR-202ENST00000504396 PORCNQ9H237 461 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 ZBTB21Q9ULJ3 1066 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 PCDHB3Q9Y5E6 796 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 CDK5RAP2Q96SN8 1893 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 LAMA3Q16787 3333 aa11.09□□□□□ -0.63
DHFR-202ENST00000504396 FRMPD3Q5JV73 1810 aa11.08□□□□□ -0.64
DHFR-202ENST00000504396 GNAI2P04899 355 aa11.08□□□□□ -0.64
DHFR-202ENST00000504396 KMT5BQ4FZB7 885 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms