RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SLC44A5Q8NCS7 719 aa14.34□□□□□ -0.11
MED28-203ENST00000503945 YTHDC1Q96MU7 727 aaKnown RBP14.34□□□□□ -0.11
MED28-203ENST00000503945 NBPF3Q9H094 633 aa14.34□□□□□ -0.11
MED28-203ENST00000503945 C11orf49Q9H6J7 331 aa14.34□□□□□ -0.11
MED28-203ENST00000503945 RPAP3Q9H6T3 665 aaPredicted RBP14.34□□□□□ -0.11
MED28-203ENST00000503945 SH2D4AQ9H788 454 aa14.34□□□□□ -0.11
MED28-203ENST00000503945 ARHGEF10LQ9HCE6 1279 aa14.34□□□□□ -0.11
MED28-203ENST00000503945 OGDHLQ9ULD0 1010 aa14.34□□□□□ -0.11
MED28-203ENST00000503945 DDX60LQ5H9U9 1706 aaKnown RBP14.34□□□□□ -0.11
MED28-203ENST00000503945 TTC41PQ6P2S7 1318 aa14.34□□□□□ -0.11
MED28-203ENST00000503945 CYP2D7A0A087X1C5 515 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 A0A1W2PRG0 241 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 SYN1P17600 705 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 GNAT2P19087 354 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 TSHZ3Q63HK5 1081 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 GIMAP6Q6P9H5 292 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 POTEEQ6S8J3 1075 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 GPR142Q7Z601 462 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 SLC17A8Q8NDX2 589 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 APPBP2Q92624 585 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 MKNK2Q9HBH9 465 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 MYH1P12882 1939 aa14.33□□□□□ -0.12
MED28-203ENST00000503945 MINDY4BA8MYZ0 360 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 PATL2C9JE40 543 aaKnown RBP14.32□□□□□ -0.12
MED28-203ENST00000503945 AKR1B1P15121 316 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 RGS2P41220 211 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 MAP3K21Q5TCX8 1036 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 ANKRD45Q5TZF3 282 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 WDR78Q5VTH9 848 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 LBX2Q6XYB7 198 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 LPAR1Q92633 364 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 USP6NLQ92738 828 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 TANGO6Q9C0B7 1094 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 PORCNQ9H237 461 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 ARPP21Q9UBL0 812 aaPredicted RBP14.32□□□□□ -0.12
MED28-203ENST00000503945 IVNS1ABPQ9Y6Y0 642 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 MAST2Q6P0Q8 1798 aa14.32□□□□□ -0.12
MED28-203ENST00000503945 GSG1L2A8MUP6 293 aa14.31□□□□□ -0.12
MED28-203ENST00000503945 PRKAR2AP13861 404 aaKnown RBP14.31□□□□□ -0.12
MED28-203ENST00000503945 ATP2B2Q01814 1243 aa14.31□□□□□ -0.12
MED28-203ENST00000503945 ICA1Q05084 483 aa14.31□□□□□ -0.12
MED28-203ENST00000503945 CACNB2Q08289 660 aaPredicted RBP14.31□□□□□ -0.12
MED28-203ENST00000503945 SBK1Q52WX2 424 aa14.31□□□□□ -0.12
MED28-203ENST00000503945 MORN1Q5T089 497 aa14.31□□□□□ -0.12
MED28-203ENST00000503945 CRBNQ96SW2 442 aa14.31□□□□□ -0.12
MED28-203ENST00000503945 ZNF287Q9HBT7 754 aa14.31□□□□□ -0.12
MED28-203ENST00000503945 TMX2Q9Y320 296 aa14.31□□□□□ -0.12
MED28-203ENST00000503945 DLL1O00548 723 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 STRNO43815 780 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 CNMDO75829 334 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
MED28-203ENST00000503945 MAGEA10P43363 369 aaPredicted RBP14.3□□□□□ -0.12
MED28-203ENST00000503945 AAMPQ13685 434 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 CCL14Q16627 93 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 LHX8Q68G74 356 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 ZNF444Q8N0Y2 327 aaPredicted RBP14.3□□□□□ -0.12
MED28-203ENST00000503945 NACAP1Q9BZK3 213 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 BTBD7Q9P203 1132 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 PFASO15067 1338 aa14.3□□□□□ -0.12
MED28-203ENST00000503945 SLC15A5A6NIM6 579 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 SPDYE16A6NNV3 312 aaPredicted RBP14.29□□□□□ -0.12
MED28-203ENST00000503945 SMIM22K7EJ46 135 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 GPAA1O43292 621 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 FLOT1O75955 427 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
MED28-203ENST00000503945 MX1P20591 662 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 PTPREP23469 700 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 CCND3P30281 292 aaPredicted RBP14.29□□□□□ -0.12
MED28-203ENST00000503945 TDO2P48775 406 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 MAP2K5Q13163 448 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 DPP9Q86TI2 863 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 SPICE1Q8N0Z3 855 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 MB21D1Q8N884 522 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 FSD1Q9BTV5 496 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 VCPKMTQ9H867 229 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
MED28-203ENST00000503945 RAD21O60216 631 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 SLC3A2P08195 630 aaKnown RBP14.28□□□□□ -0.12
MED28-203ENST00000503945 DSG3P32926 999 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
MED28-203ENST00000503945 PLS1Q14651 629 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 KIAA1755Q5JYT7 1200 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 MFSD14CQ5VZR4 134 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 Q7L0L9 218 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 IFNL3Q8IZI9 196 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 PI4K2BQ8TCG2 481 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 OTUD7AQ8TE49 926 aaPredicted RBP14.28□□□□□ -0.12
MED28-203ENST00000503945 COL6A3P12111 3177 aa14.28□□□□□ -0.12
MED28-203ENST00000503945 WDR46O15213 610 aaKnown RBP14.27□□□□□ -0.13
MED28-203ENST00000503945 COL6A1P12109 1028 aa14.27□□□□□ -0.13
MED28-203ENST00000503945 LRIT3Q3SXY7 679 aa14.27□□□□□ -0.13
MED28-203ENST00000503945 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
MED28-203ENST00000503945 APBA2Q99767 749 aa14.27□□□□□ -0.13
MED28-203ENST00000503945 MOV10L1Q9BXT6 1211 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms