RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SLC35G1Q2M3R5 365 aa24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 EARS2Q5JPH6 523 aaKnown RBP24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 DEFB132Q7Z7B7 95 aa24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 CEP95Q96GE4 821 aa24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 CLIC6Q96NY7 704 aa24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 SDF4Q9BRK5 362 aa24.54■■□□□ 1.52
UBE2D3-216ENST00000503742 ESPNB1AK53 854 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 DNAJC25Q9H1X3 360 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 MYH8P13535 1937 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 MYO3BQ8WXR4 1341 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 FAM205CA6NFA0 338 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 PTPREP23469 700 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 SF3B2Q13435 895 aaKnown RBP24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 STX1AQ16623 288 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 AOC3Q16853 763 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 SUPT20HQ8NEM7 779 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 LZTS2Q9BRK4 669 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 SH3GLB2Q9NR46 395 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 FBXO2Q9UK22 296 aaPredicted RBP24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 CEP131Q9UPN4 1083 aa24.53■■□□□ 1.52
UBE2D3-216ENST00000503742 AP5Z1O43299 807 aa24.52■■□□□ 1.52
UBE2D3-216ENST00000503742 ADCY5O95622 1261 aa24.52■■□□□ 1.52
UBE2D3-216ENST00000503742 TOP1P11387 765 aaKnown RBP24.52■■□□□ 1.52
UBE2D3-216ENST00000503742 LUZP1Q86V48 1076 aa24.52■■□□□ 1.52
UBE2D3-216ENST00000503742 KIAA0825Q8IV33 1275 aa24.52■■□□□ 1.52
UBE2D3-216ENST00000503742 SWAP70Q9UH65 585 aa24.52■■□□□ 1.52
UBE2D3-216ENST00000503742 CYTH3O43739 400 aa24.51■■□□□ 1.51
UBE2D3-216ENST00000503742 SYKP43405 635 aa24.51■■□□□ 1.51
UBE2D3-216ENST00000503742 ZNF165P49910 485 aa24.51■■□□□ 1.51
UBE2D3-216ENST00000503742 SERPINB13Q9UIV8 391 aa24.51■■□□□ 1.51
UBE2D3-216ENST00000503742 IGKV6D-41A0A0C4DH26 115 aa24.51■■□□□ 1.51
UBE2D3-216ENST00000503742 KIAA1468Q9P260 1216 aa24.51■■□□□ 1.51
UBE2D3-216ENST00000503742 NLRP5P59047 1200 aa24.5■■□□□ 1.51
UBE2D3-216ENST00000503742 NFIAQ12857 509 aa24.5■■□□□ 1.51
UBE2D3-216ENST00000503742 ZNF579Q8NAF0 562 aaKnown RBP24.5■■□□□ 1.51
UBE2D3-216ENST00000503742 FBXO41Q8TF61 875 aa24.5■■□□□ 1.51
UBE2D3-216ENST00000503742 PIBF1Q8WXW3 757 aa24.5■■□□□ 1.51
UBE2D3-216ENST00000503742 SRPRBQ9Y5M8 271 aaKnown RBP24.5■■□□□ 1.51
UBE2D3-216ENST00000503742 TRIM75PA6NK02 468 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 C21orf2O43822 256 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 GRIPAP1Q4V328 841 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 SPZ1Q9BXG8 430 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 ANO10Q9NW15 660 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 MTMR4Q9NYA4 1195 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 NOM1Q5C9Z4 860 aaKnown RBP24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 C11orf57Q6ZUT1 292 aaPredicted RBP24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 SLC16A10Q8TF71 515 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 EHD4Q9H223 541 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 SERPINA10Q9UK55 444 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 PCDHAC2Q9Y5I4 1007 aa24.49■■□□□ 1.51
UBE2D3-216ENST00000503742 KLRF2D3W0D1 207 aa24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 AKR1B1P15121 316 aa24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 CALML3P27482 149 aa24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 SHMT1P34896 483 aa24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 GRIN1Q05586 938 aa24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 IQCB1Q15051 598 aa24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 ERCC4Q92889 916 aaPredicted RBP24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 IDI2Q9BXS1 227 aa24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 NOL7Q9UMY1 257 aaKnown RBP24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 GREB1LQ9C091 1923 aaPredicted RBP24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 PSME4Q14997 1843 aa24.48■■□□□ 1.51
UBE2D3-216ENST00000503742 PARP1P09874 1014 aaKnown RBP24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 ATP2B1P20020 1258 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 SMARCA1P28370 1054 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 RASGRP2Q7LDG7 609 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 ZSCAN30Q86W11 494 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 TTLL6Q8N841 843 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 CCDC39Q9UFE4 941 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 SIPA1L1O43166 1804 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 YDJCA8MPS7 323 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 NPM3O75607 178 aaKnown RBP24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 HLA-DOAP06340 250 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 FAM177A1Q8N128 213 aaPredicted RBP24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 GPKOWQ92917 476 aaPredicted RBP eCLIP24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 KCNH3Q9ULD8 1083 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 MTMR7Q9Y216 660 aa24.47■■□□□ 1.51
UBE2D3-216ENST00000503742 WNT7AO00755 349 aa24.46■■□□□ 1.51
UBE2D3-216ENST00000503742 ADAMTS3O15072 1205 aa24.46■■□□□ 1.51
UBE2D3-216ENST00000503742 PPIP5K2O43314 1243 aa24.46■■□□□ 1.51
UBE2D3-216ENST00000503742 BMP15O95972 392 aa24.46■■□□□ 1.51
UBE2D3-216ENST00000503742 GOLGA8HP0CJ92 632 aa24.46■■□□□ 1.51
UBE2D3-216ENST00000503742 TRAPPC10P48553 1259 aa24.46■■□□□ 1.51
UBE2D3-216ENST00000503742 TYW1BQ6NUM6 668 aa24.46■■□□□ 1.51
UBE2D3-216ENST00000503742 ZFPM1Q8IX07 1006 aa24.46■■□□□ 1.51
UBE2D3-216ENST00000503742 KCNA3P22001 575 aa24.45■■□□□ 1.51
UBE2D3-216ENST00000503742 WWC2Q6AWC2 1192 aa24.45■■□□□ 1.51
UBE2D3-216ENST00000503742 USP17L2Q6R6M4 530 aa24.45■■□□□ 1.51
UBE2D3-216ENST00000503742 ELOA2Q8IYF1 753 aaPredicted RBP24.45■■□□□ 1.51
UBE2D3-216ENST00000503742 BLIDQ8IZY5 108 aa24.45■■□□□ 1.51
UBE2D3-216ENST00000503742 PCDHA4Q9UN74 947 aa24.45■■□□□ 1.51
UBE2D3-216ENST00000503742 KIF13BQ9NQT8 1826 aa24.45■■□□□ 1.51
UBE2D3-216ENST00000503742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.45■■□□□ 1.5
UBE2D3-216ENST00000503742 CCDC93Q567U6 631 aa24.45■■□□□ 1.5
UBE2D3-216ENST00000503742 BARHL2Q9NY43 387 aa24.45■■□□□ 1.5
UBE2D3-216ENST00000503742 FAM198AQ9UFP1 575 aa24.45■■□□□ 1.5
UBE2D3-216ENST00000503742 A0A087WWV3 80 aa24.44■■□□□ 1.5
UBE2D3-216ENST00000503742 M0R2N6 131 aa24.44■■□□□ 1.5
UBE2D3-216ENST00000503742 STXBP3O00186 592 aa24.44■■□□□ 1.5
UBE2D3-216ENST00000503742 TTC38Q5R3I4 469 aa24.44■■□□□ 1.5
UBE2D3-216ENST00000503742 RTKN2Q8IZC4 609 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms