RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 ZBTB47Q9UFB7 747 aaPredicted RBP23.31■■□□□ 1.32
UBE2D3-215ENST00000503418 RPTORQ8N122 1335 aa23.31■■□□□ 1.32
UBE2D3-215ENST00000503418 GSG1L2A8MUP6 293 aa23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 GPAA1O43292 621 aa23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 GLRX3O76003 335 aaKnown RBP23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 XRCC5P13010 732 aaKnown RBP23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 COG2Q14746 738 aa23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 LRRFIP1Q32MZ4 808 aaKnown RBP23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 KIAA1755Q5JYT7 1200 aa23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 MORN1Q5T089 497 aa23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 SIAH1Q8IUQ4 282 aa23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 SPICE1Q8N0Z3 855 aa23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 PI4K2BQ8TCG2 481 aa23.3■■□□□ 1.32
UBE2D3-215ENST00000503418 MINDY4BA8MYZ0 360 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 M0R2C6 588 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 PRKAR2AP13861 404 aaKnown RBP23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 TRMT44Q8IYL2 757 aaKnown RBP23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 LPAR1Q92633 364 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 USP6NLQ92738 828 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 APBA2Q99767 749 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 CRISPLD2Q9H0B8 497 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 VCPKMTQ9H867 229 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 TMX2Q9Y320 296 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 IVNS1ABPQ9Y6Y0 642 aa23.29■■□□□ 1.32
UBE2D3-215ENST00000503418 RLFQ13129 1914 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 H0YGN5 161 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 EEF2P13639 858 aaKnown RBP23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 CAPN2P17655 700 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 MX1P20591 662 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 MAP2K5Q13163 448 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 CCL14Q16627 93 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 SBK1Q52WX2 424 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 GIMAP6Q6P9H5 292 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 SAMD1Q6SPF0 538 aaPredicted RBP23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 FSD1Q9BTV5 496 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 HOXC10Q9NYD6 342 aa23.28■■□□□ 1.32
UBE2D3-215ENST00000503418 FLOT1O75955 427 aa23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 APPP05067 770 aa23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 GNAT2P19087 354 aa23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 TDO2P48775 406 aa23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 ANKRD45Q5TZF3 282 aa23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 KANSL2Q9H9L4 492 aa23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 MKNK2Q9HBH9 465 aa23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 EPB41L4AQ9HCS5 686 aaPredicted RBP23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 A0A0G2JMZ2 1700 aa23.27■■□□□ 1.32
UBE2D3-215ENST00000503418 RAD21O60216 631 aa23.26■■□□□ 1.31
UBE2D3-215ENST00000503418 PTPREP23469 700 aa23.26■■□□□ 1.31
UBE2D3-215ENST00000503418 HABP4Q5JVS0 413 aaKnown RBP23.26■■□□□ 1.31
UBE2D3-215ENST00000503418 MAP3K21Q5TCX8 1036 aa23.26■■□□□ 1.31
UBE2D3-215ENST00000503418 PAWRQ96IZ0 340 aaKnown RBP23.26■■□□□ 1.31
UBE2D3-215ENST00000503418 PARP14Q460N5 1801 aa23.26■■□□□ 1.31
UBE2D3-215ENST00000503418 SLC15A5A6NIM6 579 aa23.25■■□□□ 1.31
UBE2D3-215ENST00000503418 WDR46O15213 610 aaKnown RBP23.25■■□□□ 1.31
UBE2D3-215ENST00000503418 CACNB2Q08289 660 aaPredicted RBP23.25■■□□□ 1.31
UBE2D3-215ENST00000503418 DIS3LQ8TF46 1054 aaKnown RBP23.25■■□□□ 1.31
UBE2D3-215ENST00000503418 SEC62Q99442 399 aaKnown RBP23.25■■□□□ 1.31
UBE2D3-215ENST00000503418 GREB1LQ9C091 1923 aaPredicted RBP23.25■■□□□ 1.31
UBE2D3-215ENST00000503418 RASA1P20936 1047 aa23.24■■□□□ 1.31
UBE2D3-215ENST00000503418 DSG3P32926 999 aa23.24■■□□□ 1.31
UBE2D3-215ENST00000503418 PLS1Q14651 629 aa23.24■■□□□ 1.31
UBE2D3-215ENST00000503418 ATG4CQ96DT6 458 aa23.24■■□□□ 1.31
UBE2D3-215ENST00000503418 MOV10L1Q9BXT6 1211 aaKnown RBP23.24■■□□□ 1.31
UBE2D3-215ENST00000503418 SPATC1LQ9H0A9 340 aa23.24■■□□□ 1.31
UBE2D3-215ENST00000503418 GOPCQ9HD26 462 aa23.24■■□□□ 1.31
UBE2D3-215ENST00000503418 ROBO3Q96MS0 1386 aa23.24■■□□□ 1.31
UBE2D3-215ENST00000503418 CEP290O15078 2479 aa23.23■■□□□ 1.31
UBE2D3-215ENST00000503418 PATL2C9JE40 543 aaKnown RBP23.23■■□□□ 1.31
UBE2D3-215ENST00000503418 GRB14Q14449 540 aa23.23■■□□□ 1.31
UBE2D3-215ENST00000503418 NECAB2Q7Z6G3 386 aa23.23■■□□□ 1.31
UBE2D3-215ENST00000503418 MB21D1Q8N884 522 aa23.23■■□□□ 1.31
UBE2D3-215ENST00000503418 ANKLE1Q8NAG6 615 aa23.23■■□□□ 1.31
UBE2D3-215ENST00000503418 COLQQ9Y215 455 aaPredicted RBP23.23■■□□□ 1.31
UBE2D3-215ENST00000503418 COL11A1P12107 1806 aaPredicted RBP23.23■■□□□ 1.31
UBE2D3-215ENST00000503418 CCND3P30281 292 aaPredicted RBP23.22■■□□□ 1.31
UBE2D3-215ENST00000503418 HDAC1Q13547 482 aaPredicted RBP23.22■■□□□ 1.31
UBE2D3-215ENST00000503418 IFNL3Q8IZI9 196 aa23.22■■□□□ 1.31
UBE2D3-215ENST00000503418 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.22■■□□□ 1.31
UBE2D3-215ENST00000503418 NACAP1Q9BZK3 213 aa23.22■■□□□ 1.31
UBE2D3-215ENST00000503418 FLRT1Q9NZU1 646 aa23.22■■□□□ 1.31
UBE2D3-215ENST00000503418 NR2E3Q9Y5X4 410 aa23.22■■□□□ 1.31
UBE2D3-215ENST00000503418 SALL3Q9BXA9 1300 aa23.22■■□□□ 1.31
UBE2D3-215ENST00000503418 ALPK3Q96L96 1907 aa23.21■■□□□ 1.31
UBE2D3-215ENST00000503418 MYH4Q9Y623 1939 aa23.21■■□□□ 1.31
UBE2D3-215ENST00000503418 EVI5O60447 810 aa23.21■■□□□ 1.31
UBE2D3-215ENST00000503418 ERCC3P19447 782 aa23.21■■□□□ 1.31
UBE2D3-215ENST00000503418 ZMYM1Q5SVZ6 1142 aa23.21■■□□□ 1.31
UBE2D3-215ENST00000503418 MFSD14CQ5VZR4 134 aa23.21■■□□□ 1.31
UBE2D3-215ENST00000503418 NPLOC4Q8TAT6 608 aa23.21■■□□□ 1.31
UBE2D3-215ENST00000503418 ZNF236Q9UL36 1845 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 PRDM1O75626 825 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 ADORA2AP29274 412 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 FAM83BQ5T0W9 1011 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 DPP9Q86TI2 863 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 NCAPG2Q86XI2 1143 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 ZNF444Q8N0Y2 327 aaPredicted RBP23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 NAPBQ9H115 298 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 ZNF287Q9HBT7 754 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 FBXO28Q9NVF7 368 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 OGDHLQ9ULD0 1010 aa23.2■■□□□ 1.3
UBE2D3-215ENST00000503418 HOXC6P09630 235 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms