RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 ROBO3Q96MS0 1386 aa14.23□□□□□ -0.13
TNPO1-202ENST00000503084 NBPF7P0C2Y1 421 aaPredicted RBP14.23□□□□□ -0.13
TNPO1-202ENST00000503084 ZYXQ15942 572 aaKnown RBP14.23□□□□□ -0.13
TNPO1-202ENST00000503084 SLF2Q8IX21 1173 aa14.23□□□□□ -0.13
TNPO1-202ENST00000503084 MTIF3Q9H2K0 278 aaKnown RBP14.23□□□□□ -0.13
TNPO1-202ENST00000503084 STARD7Q9NQZ5 370 aa14.23□□□□□ -0.13
TNPO1-202ENST00000503084 GNL3LQ9NVN8 582 aaKnown RBP14.23□□□□□ -0.13
TNPO1-202ENST00000503084 DENND2AQ9ULE3 1009 aa14.23□□□□□ -0.13
TNPO1-202ENST00000503084 GPR75-ASB3A0A0A6YYF3 556 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L15C9J2P7 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L13C9JLJ4 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L11C9JVI0 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L18D6R9N7 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L22D6RA61 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L17D6RBQ6 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L19D6RCP7 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L20D6RJB6 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L24Q0WX57 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 RALBP1Q15311 655 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 USP17L2Q6R6M4 530 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 LBX2Q6XYB7 198 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 GJD3Q8N144 294 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 ZGPATQ8N5A5 531 aaKnown RBP14.22□□□□□ -0.13
TNPO1-202ENST00000503084 ZNF384Q8TF68 577 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 IL23AQ9NPF7 189 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 ABCF2Q9UG63 623 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 PCDHA11Q9Y5I1 949 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 CACNA1GO43497 2377 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 CACNA1HO95180 2353 aa14.22□□□□□ -0.13
TNPO1-202ENST00000503084 SPDYE16A6NNV3 312 aaPredicted RBP14.21□□□□□ -0.13
TNPO1-202ENST00000503084 SEMA3EO15041 775 aa14.21□□□□□ -0.13
TNPO1-202ENST00000503084 ADAMTS4O75173 837 aa14.21□□□□□ -0.13
TNPO1-202ENST00000503084 ALDH1L1O75891 902 aa14.21□□□□□ -0.13
TNPO1-202ENST00000503084 ACLYP53396 1101 aa14.21□□□□□ -0.13
TNPO1-202ENST00000503084 OTOP2Q7RTS6 562 aa14.21□□□□□ -0.13
TNPO1-202ENST00000503084 C12orf42Q96LP6 360 aa14.21□□□□□ -0.13
TNPO1-202ENST00000503084 CERS4Q9HA82 394 aa14.21□□□□□ -0.13
TNPO1-202ENST00000503084 COL4A4P53420 1690 aaPredicted RBP14.2□□□□□ -0.14
TNPO1-202ENST00000503084 EPG5Q9HCE0 2579 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 ALADP13716 330 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 VCAM1P19320 739 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 CYP2C18P33260 490 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 MECOMQ03112 1051 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 RASGRF1Q13972 1273 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 CATSPERGQ6ZRH7 1159 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 MAML3Q96JK9 1138 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 FEZ1Q99689 392 aa14.2□□□□□ -0.14
TNPO1-202ENST00000503084 MOV10L1Q9BXT6 1211 aaKnown RBP14.2□□□□□ -0.14
TNPO1-202ENST00000503084 RNF216Q9NWF9 866 aaPredicted RBP14.2□□□□□ -0.14
TNPO1-202ENST00000503084 MROH7Q68CQ1 1323 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 PTPRZ1P23471 2315 aaPredicted RBP14.19□□□□□ -0.14
TNPO1-202ENST00000503084 EYA2O00167 538 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 FGBP02675 491 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 CA3P07451 260 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 TAL1P17542 331 aaPredicted RBP14.19□□□□□ -0.14
TNPO1-202ENST00000503084 SSTR3P32745 418 aaPredicted RBP14.19□□□□□ -0.14
TNPO1-202ENST00000503084 ATP2B3Q16720 1220 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 SLC4A10Q6U841 1118 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 FAM178BQ8IXR5 827 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 NUP133Q8WUM0 1156 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 PI4KBQ9UBF8 816 aa14.19□□□□□ -0.14
TNPO1-202ENST00000503084 SYNRGQ9UMZ2 1314 aa14.18□□□□□ -0.14
TNPO1-202ENST00000503084 ERCC3P19447 782 aa14.18□□□□□ -0.14
TNPO1-202ENST00000503084 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
TNPO1-202ENST00000503084 TSEN34Q9BSV6 310 aaKnown RBP14.18□□□□□ -0.14
TNPO1-202ENST00000503084 DCHS1Q96JQ0 3298 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 MYADML2A6NDP7 307 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 DCXO43602 365 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 STRNO43815 780 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 ADORA1P30542 326 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 CDK7P50613 346 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 HFE2Q6ZVN8 426 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 ATG9AQ7Z3C6 839 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 FAM126BQ8IXS8 530 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 GINM1Q9NU53 330 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 SLC5A4Q9NY91 659 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 NRBP1Q9UHY1 535 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 SLC4A7Q9Y6M7 1214 aa14.17□□□□□ -0.14
TNPO1-202ENST00000503084 UMODL1Q5DID0 1318 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 MOXD2PA6NHM9 499 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 ARHGEF15O94989 841 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 GH2P01242 217 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 ATP2A2P16615 1042 aaKnown RBP14.16□□□□□ -0.14
TNPO1-202ENST00000503084 KCNA10Q16322 511 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 SPTY2D1Q68D10 685 aaPredicted RBP14.16□□□□□ -0.14
TNPO1-202ENST00000503084 CCSAPQ6IQ19 270 aaPredicted RBP14.16□□□□□ -0.14
TNPO1-202ENST00000503084 SAMD1Q6SPF0 538 aaPredicted RBP14.16□□□□□ -0.14
TNPO1-202ENST00000503084 SHCBP1Q8NEM2 672 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 KLHDC9Q8NEP7 349 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 PRSS33Q8NF86 280 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 ARNTL2Q8WYA1 636 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 SPATC1LQ9H0A9 340 aa14.16□□□□□ -0.14
TNPO1-202ENST00000503084 RPAP3Q9H6T3 665 aaPredicted RBP14.16□□□□□ -0.14
TNPO1-202ENST00000503084 PDS5AQ29RF7 1337 aaKnown RBP14.15□□□□□ -0.14
TNPO1-202ENST00000503084 RIF1Q5UIP0 2472 aaKnown RBP14.15□□□□□ -0.14
TNPO1-202ENST00000503084 ZBBXA8MT70 800 aa14.15□□□□□ -0.14
TNPO1-202ENST00000503084 MAP4K4O95819 1239 aaPredicted RBP14.15□□□□□ -0.14
TNPO1-202ENST00000503084 AKR1A1P14550 325 aa14.15□□□□□ -0.14
TNPO1-202ENST00000503084 RFX5P48382 616 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms