RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 PAGE5Q96GU1 130 aa26.22■■□□□ 1.79
SNF8-202ENST00000502492 TNS1Q9HBL0 1735 aaKnown RBP26.22■■□□□ 1.79
SNF8-202ENST00000502492 TADA3O75528 432 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 SPATA1Q5VX52 437 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 TOGARAM2Q6ZUX3 1019 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 UBXN4Q92575 508 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 SYMPKQ92797 1274 aaKnown RBP26.21■■□□□ 1.79
SNF8-202ENST00000502492 PRDM1O75626 825 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 CLCN6P51797 869 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 CUL4BQ13620 913 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 NPY5RQ15761 445 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 IQCA1Q86XH1 822 aa26.21■■□□□ 1.79
SNF8-202ENST00000502492 A0A1B0GUL6 1792 aa26.2■■□□□ 1.79
SNF8-202ENST00000502492 DLEC1Q9Y238 1755 aa26.2■■□□□ 1.79
SNF8-202ENST00000502492 CYP2D7A0A087X1C5 515 aa26.2■■□□□ 1.79
SNF8-202ENST00000502492 EFCAB8A8MWE9 144 aa26.2■■□□□ 1.79
SNF8-202ENST00000502492 DYNLL1P63167 89 aaKnown RBP26.2■■□□□ 1.79
SNF8-202ENST00000502492 MNS1Q8NEH6 495 aa26.2■■□□□ 1.79
SNF8-202ENST00000502492 GSDMAQ96QA5 445 aa26.2■■□□□ 1.79
SNF8-202ENST00000502492 TAF1LQ8IZX4 1826 aa26.2■■□□□ 1.78
SNF8-202ENST00000502492 hCG_1642624A0A1W2PR95 340 aa26.2■■□□□ 1.78
SNF8-202ENST00000502492 WTIPA6NIX2 430 aaPredicted RBP26.2■■□□□ 1.78
SNF8-202ENST00000502492 DDAH1O94760 285 aa26.2■■□□□ 1.78
SNF8-202ENST00000502492 DPYDQ12882 1025 aa26.2■■□□□ 1.78
SNF8-202ENST00000502492 BMS1Q14692 1282 aaKnown RBP26.2■■□□□ 1.78
SNF8-202ENST00000502492 ANKRD18AQ8IVF6 992 aa26.2■■□□□ 1.78
SNF8-202ENST00000502492 ZNF384Q8TF68 577 aa26.2■■□□□ 1.78
SNF8-202ENST00000502492 BAZ2AQ9UIF9 1905 aaKnown RBP26.19■■□□□ 1.78
SNF8-202ENST00000502492 WNT7AO00755 349 aa26.19■■□□□ 1.78
SNF8-202ENST00000502492 CD44P16070 742 aaKnown RBP26.19■■□□□ 1.78
SNF8-202ENST00000502492 TMTC3Q6ZXV5 915 aa26.19■■□□□ 1.78
SNF8-202ENST00000502492 PANX2Q96RD6 677 aa26.19■■□□□ 1.78
SNF8-202ENST00000502492 BSDC1Q9NW68 430 aaPredicted RBP26.19■■□□□ 1.78
SNF8-202ENST00000502492 AFMP43652 599 aa26.19■■□□□ 1.78
SNF8-202ENST00000502492 SF3B3Q15393 1217 aaKnown RBP26.19■■□□□ 1.78
SNF8-202ENST00000502492 CTR9Q6PD62 1173 aa26.19■■□□□ 1.78
SNF8-202ENST00000502492 WDR24Q96S15 920 aa26.19■■□□□ 1.78
SNF8-202ENST00000502492 BRMS1Q9HCU9 246 aa26.19■■□□□ 1.78
SNF8-202ENST00000502492 RPS6KA4O75676 772 aa26.18■■□□□ 1.78
SNF8-202ENST00000502492 MAP3K9P80192 1104 aa26.18■■□□□ 1.78
SNF8-202ENST00000502492 CAVIN4Q5BKX8 364 aa26.18■■□□□ 1.78
SNF8-202ENST00000502492 CDKAL1Q5VV42 579 aa26.18■■□□□ 1.78
SNF8-202ENST00000502492 CARD6Q9BX69 1037 aa26.18■■□□□ 1.78
SNF8-202ENST00000502492 ZNF652Q9Y2D9 606 aa26.18■■□□□ 1.78
SNF8-202ENST00000502492 GNPATO15228 680 aa26.17■■□□□ 1.78
SNF8-202ENST00000502492 IGSF3O75054 1194 aa26.17■■□□□ 1.78
SNF8-202ENST00000502492 CASQ1P31415 396 aa26.17■■□□□ 1.78
SNF8-202ENST00000502492 GNG11P61952 73 aa26.17■■□□□ 1.78
SNF8-202ENST00000502492 FHOD1Q9Y613 1164 aa26.17■■□□□ 1.78
SNF8-202ENST00000502492 AKR1B15C9JRZ8 316 aaPredicted RBP26.17■■□□□ 1.78
SNF8-202ENST00000502492 PBX1P40424 430 aa26.17■■□□□ 1.78
SNF8-202ENST00000502492 FAM84BQ96KN1 310 aaPredicted RBP26.17■■□□□ 1.78
SNF8-202ENST00000502492 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.17■■□□□ 1.78
SNF8-202ENST00000502492 SYNRGQ9UMZ2 1314 aa26.17■■□□□ 1.78
SNF8-202ENST00000502492 SEMA3EO15041 775 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 TEX33O43247 280 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 TPM1P09493 284 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 ATP2C1P98194 919 aaPredicted RBP26.16■■□□□ 1.78
SNF8-202ENST00000502492 TTC38Q5R3I4 469 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 CLEC4GQ6UXB4 293 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 C3orf67Q6ZVT6 689 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 FAM177A1Q8N128 213 aaPredicted RBP26.16■■□□□ 1.78
SNF8-202ENST00000502492 KIFC2Q96AC6 838 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 ADD3Q9UEY8 706 aaKnown RBP26.16■■□□□ 1.78
SNF8-202ENST00000502492 SCN7AQ01118 1682 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 PPP1R3GB7ZBB8 358 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 TERF2Q15554 542 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 ZNF174Q15697 407 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 NOM1Q5C9Z4 860 aaKnown RBP26.16■■□□□ 1.78
SNF8-202ENST00000502492 MINPP1Q9UNW1 487 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 CNTNAP5Q8WYK1 1306 aa26.16■■□□□ 1.78
SNF8-202ENST00000502492 ORC4O43929 436 aa26.15■■□□□ 1.78
SNF8-202ENST00000502492 CASP1P29466 404 aa26.15■■□□□ 1.78
SNF8-202ENST00000502492 ERFEQ4G0M1 354 aa26.15■■□□□ 1.78
SNF8-202ENST00000502492 ARGLU1Q9NWB6 273 aaPredicted RBP26.15■■□□□ 1.78
SNF8-202ENST00000502492 USP17L12C9JPN9 530 aa26.15■■□□□ 1.78
SNF8-202ENST00000502492 USP17L21D6R901 530 aa26.15■■□□□ 1.78
SNF8-202ENST00000502492 ZRANB2O95218 330 aaKnown RBP eCLIP26.15■■□□□ 1.78
SNF8-202ENST00000502492 HMGB2P26583 209 aaKnown RBP26.15■■□□□ 1.78
SNF8-202ENST00000502492 CTAGE1Q96RT6 745 aa26.15■■□□□ 1.78
SNF8-202ENST00000502492 RTCBQ9Y3I0 505 aaKnown RBP26.15■■□□□ 1.78
SNF8-202ENST00000502492 MRFAP1Q9Y605 127 aa26.15■■□□□ 1.78
SNF8-202ENST00000502492 KLHL10Q6JEL2 608 aa26.14■■□□□ 1.78
SNF8-202ENST00000502492 SRBD1Q8N5C6 995 aaKnown RBP26.14■■□□□ 1.78
SNF8-202ENST00000502492 NAA15Q9BXJ9 866 aaKnown RBP26.14■■□□□ 1.78
SNF8-202ENST00000502492 PTGDRQ13258 359 aa26.14■■□□□ 1.77
SNF8-202ENST00000502492 STX17P56962 302 aa26.13■■□□□ 1.77
SNF8-202ENST00000502492 E2F4Q16254 413 aa26.13■■□□□ 1.77
SNF8-202ENST00000502492 FBXO33Q7Z6M2 555 aa26.13■■□□□ 1.77
SNF8-202ENST00000502492 AMIGO3Q86WK7 504 aa26.13■■□□□ 1.77
SNF8-202ENST00000502492 IGSF22Q8N9C0 903 aa26.13■■□□□ 1.77
SNF8-202ENST00000502492 NSUN4Q96CB9 384 aaKnown RBP26.13■■□□□ 1.77
SNF8-202ENST00000502492 DESI2Q9BSY9 194 aa26.13■■□□□ 1.77
SNF8-202ENST00000502492 PNMA6AP0CW24 399 aaPredicted RBP26.13■■□□□ 1.77
SNF8-202ENST00000502492 TRAPPC10P48553 1259 aa26.13■■□□□ 1.77
SNF8-202ENST00000502492 SMIM5Q71RC9 77 aa26.13■■□□□ 1.77
SNF8-202ENST00000502492 CCDC175P0C221 793 aa26.12■■□□□ 1.77
SNF8-202ENST00000502492 RBL2Q08999 1139 aa26.12■■□□□ 1.77
SNF8-202ENST00000502492 MTF1Q14872 753 aa26.12■■□□□ 1.77
SNF8-202ENST00000502492 CTCFLQ8NI51 663 aaPredicted RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms