RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CLEC16AQ2KHT3 1053 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 LRRFIP1Q32MZ4 808 aaKnown RBP4.15□□□□□ -1.75
SMAD1-203ENST00000502342 RALGPS1Q5JS13 557 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 FYB2Q5VWT5 728 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 CDCP2Q5VXM1 449 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 CCDC81Q6ZN84 652 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 NLRC3Q7RTR2 1065 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 TTC6Q86TZ1 520 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 TMEM192Q8IY95 271 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 PIWIL2Q8TC59 973 aaKnown RBP4.15□□□□□ -1.75
SMAD1-203ENST00000502342 VWCEQ96DN2 955 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 SLC9A7Q96T83 725 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 ADAMTS10Q9H324 1103 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 TRIT1Q9H3H1 467 aaKnown RBP4.15□□□□□ -1.75
SMAD1-203ENST00000502342 ACBD3Q9H3P7 528 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 GPATCH2Q9NW75 528 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 PODXL2Q9NZ53 605 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 LMCD1Q9NZU5 365 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 SLAMF8Q9P0V8 285 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 MINPP1Q9UNW1 487 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 EFR3BQ9Y2G0 817 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 RNF114Q9Y508 228 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 DNAJC25-GNG10A0A024R161 153 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 BIN1O00499 593 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 PAX4O43316 350 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 HK2P52789 917 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 ERVFC1P60507 584 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 EGR3Q06889 387 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 SNW1Q13573 536 aaKnown RBP4.14□□□□□ -1.75
SMAD1-203ENST00000502342 NBPF12Q5TAG4 269 aaPredicted RBP4.14□□□□□ -1.75
SMAD1-203ENST00000502342 TMC3Q7Z5M5 1100 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 THAP5Q7Z6K1 395 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 TMEM40Q8WWA1 233 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMAD1-203ENST00000502342 ASCC2Q9H1I8 757 aaPredicted RBP4.14□□□□□ -1.75
SMAD1-203ENST00000502342 FAM86C1Q9NVL1 165 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 DUSP13Q9UII6 198 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 FBXL21Q9UKT6 434 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 CTNND2Q9UQB3 1225 aa4.14□□□□□ -1.75
SMAD1-203ENST00000502342 CARMIL2Q6F5E8 1435 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 MEIS1O00470 390 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 CLEC3AO75596 197 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 PAPLNO95428 1278 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 TP53P04637 393 aaPredicted RBP4.13□□□□□ -1.75
SMAD1-203ENST00000502342 ACRP10323 421 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 SRFP11831 508 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 LTKP29376 864 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 RNF4P78317 190 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 RAD51AP2Q09MP3 1159 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 NBPF9Q3BBW0 867 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 ATG4DQ86TL0 474 aaPredicted RBP4.13□□□□□ -1.75
SMAD1-203ENST00000502342 TSPYL5Q86VY4 417 aaPredicted RBP4.13□□□□□ -1.75
SMAD1-203ENST00000502342 ASIC4Q96FT7 647 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 SLC6A18Q96N87 628 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 CRBNQ96SW2 442 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 ASPNQ9BXN1 380 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 GPR62Q9BZJ7 368 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 PCDHA11Q9Y5I1 949 aa4.13□□□□□ -1.75
SMAD1-203ENST00000502342 SSU72P8A0A1W2PR75 194 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 IMPDH2P12268 514 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 JUNBP17275 347 aaPredicted RBP4.12□□□□□ -1.75
SMAD1-203ENST00000502342 ITGB5P18084 799 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 TRHRP34981 398 aaPredicted RBP4.12□□□□□ -1.75
SMAD1-203ENST00000502342 AFMP43652 599 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 NASPP49321 788 aaPredicted RBP4.12□□□□□ -1.75
SMAD1-203ENST00000502342 ZYXQ15942 572 aaKnown RBP4.12□□□□□ -1.75
SMAD1-203ENST00000502342 TDRD10Q5VZ19 366 aaKnown RBP4.12□□□□□ -1.75
SMAD1-203ENST00000502342 TMPRSS7Q7RTY8 843 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 USHBP1Q8N6Y0 703 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 CPLX3Q8WVH0 158 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 FAM168AQ92567 244 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 SYTL4Q96C24 671 aaPredicted RBP4.12□□□□□ -1.75
SMAD1-203ENST00000502342 GPRASP2Q96D09 838 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 ALPK1Q96QP1 1244 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 PRDM14Q9GZV8 571 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 MKRN2Q9H000 416 aaKnown RBP4.12□□□□□ -1.75
SMAD1-203ENST00000502342 CCSER2Q9H7U1 834 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 C19orf73Q9NVV2 129 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 ZNRF3Q9ULT6 936 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 INPP5FQ9Y2H2 1132 aa4.12□□□□□ -1.75
SMAD1-203ENST00000502342 C9IYK1 514 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 TNFRSF10CO14798 259 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 RPL10P27635 214 aaKnown RBP4.11□□□□□ -1.75
SMAD1-203ENST00000502342 ERCC5P28715 1186 aaPredicted RBP4.11□□□□□ -1.75
SMAD1-203ENST00000502342 EIF6P56537 245 aaKnown RBP4.11□□□□□ -1.75
SMAD1-203ENST00000502342 NMIQ13287 307 aaPredicted RBP4.11□□□□□ -1.75
SMAD1-203ENST00000502342 PPP2R5EQ16537 467 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 GAB4Q2WGN9 574 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 INTS3Q68E01 1043 aaKnown RBP4.11□□□□□ -1.75
SMAD1-203ENST00000502342 ZPBP2Q6X784 338 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 UNC5AQ6ZN44 842 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 CCDC144CPQ8IYA2 1237 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 TCTN2Q96GX1 697 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 CCDC120Q96HB5 630 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 SPATA32Q96LK8 384 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 FOXP3Q9BZS1 431 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 C19orf44Q9H6X5 657 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 KCNK12Q9HB15 430 aa4.11□□□□□ -1.75
SMAD1-203ENST00000502342 GFOD1Q9NXC2 390 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms