RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 IQUBQ8NA54 791 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 NOL10Q9BSC4 688 aaKnown RBP18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 NUP188Q5SRE5 1749 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 ATRNO75882 1429 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 CCDC194A0A1B0GVG4 234 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 USP17L3A6NCW0 530 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 USP17L4A6NCW7 530 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 KIF5CO60282 957 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 RPS8P62241 208 aaKnown RBP18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 TBC1D9BQ66K14 1250 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 USP17L1Q7RTZ2 530 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 NLRP3Q96P20 1036 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 PHF20Q9BVI0 1012 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 RAD21O60216 631 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 RHOXF2BP0C7M4 288 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 RAD9BQ6WBX8 426 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 RASGRP2Q7LDG7 609 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 STAG2Q8N3U4 1231 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 RHOXF2Q9BQY4 288 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 PHLPP2Q6ZVD8 1323 aa18.73■□□□□ 0.59
ZCCHC3-201ENST00000500893 TRIM49BA6NDI0 452 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 PRPF3O43395 683 aaKnown RBP18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 SCG2P13521 617 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 ZNF18P17022 549 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 DPYDQ12882 1025 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 TMTC3Q6ZXV5 915 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 TMEM139Q8IV31 216 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 ANKRD20A12PQ8NF67 263 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 ZNF384Q8TF68 577 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 SLF1Q9BQI6 1058 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 PNMA6AP0CW24 399 aaPredicted RBP18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 TXLNAP40222 546 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 SETDB2Q96T68 719 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 DCP1AQ9NPI6 582 aaPredicted RBP18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 FXR1P51114 621 aaKnown RBP eCLIP18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 UBXN1Q04323 297 aa18.72■□□□□ 0.59
ZCCHC3-201ENST00000500893 PARP4Q9UKK3 1724 aaKnown RBP18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 AKAP11Q9UKA4 1901 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 FAM237AA0A1B0GTK4 181 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 SARSP49591 514 aaKnown RBP18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 GYS2P54840 703 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 MCM6Q14566 821 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 NR1I3Q14994 352 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 INF2Q27J81 1249 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 TFR2Q9UP52 801 aa18.71■□□□□ 0.59
ZCCHC3-201ENST00000500893 GNPATO15228 680 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 ZPR1O75312 459 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 ABL1P00519 1130 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 UBE4AQ14139 1066 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 RBM28Q9NW13 759 aaKnown RBP18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 TADA3O75528 432 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 UBA7P41226 1012 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 UTP14CQ5TAP6 766 aaKnown RBP18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 MAPKAPK5Q8IW41 473 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 ZNF579Q8NAF0 562 aaKnown RBP18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 FERMT2Q96AC1 680 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 NSUN4Q96CB9 384 aaKnown RBP18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 HINFPQ9BQA5 517 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 GUCA1BQ9UMX6 200 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 TSPY3P0CV98 308 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 TSPY8P0CW00 308 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 ERCC5P28715 1186 aaPredicted RBP18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 TRIML1Q8N9V2 468 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 AK7Q96M32 723 aa18.7■□□□□ 0.58
ZCCHC3-201ENST00000500893 KRT9P35527 623 aa18.69■□□□□ 0.58
ZCCHC3-201ENST00000500893 TERF2Q15554 542 aa18.69■□□□□ 0.58
ZCCHC3-201ENST00000500893 TGFBRAP1Q8WUH2 860 aa18.69■□□□□ 0.58
ZCCHC3-201ENST00000500893 C8orf37Q96NL8 207 aa18.69■□□□□ 0.58
ZCCHC3-201ENST00000500893 KRT31Q15323 416 aa18.69■□□□□ 0.58
ZCCHC3-201ENST00000500893 PNMA1Q8ND90 353 aa18.69■□□□□ 0.58
ZCCHC3-201ENST00000500893 SPEF2Q9C093 1822 aa18.69■□□□□ 0.58
ZCCHC3-201ENST00000500893 BSDC1Q9NW68 430 aaPredicted RBP18.69■□□□□ 0.58
ZCCHC3-201ENST00000500893 CALM1P0DP23 149 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 CALM2P0DP24 149 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 CALM3P0DP25 149 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 ZFP91Q96JP5 570 aaPredicted RBP18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 XDHP47989 1333 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 H2AFXP16104 143 aaPredicted RBP18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 PAK1Q13153 545 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 TBX2Q13207 712 aaPredicted RBP18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 LINC00116Q8NCU8 138 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 TRIM47Q96LD4 638 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 PARD6BQ9BYG5 372 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 A0A1B0GTH6 734 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 EFCAB8A8MWE9 144 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 CCDC178Q5BJE1 867 aa18.68■□□□□ 0.58
ZCCHC3-201ENST00000500893 GOLGA6L9A6NEM1 432 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 PPP1R3GB7ZBB8 358 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 KIF5BP33176 963 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 FUT2Q10981 343 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 LETM2Q2VYF4 491 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 GSDMAQ96QA5 445 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 ARFGAP3Q9NP61 516 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 FHOD1Q9Y613 1164 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 TSR1Q2NL82 804 aaKnown RBP18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 WWC2Q6AWC2 1192 aa18.67■□□□□ 0.58
ZCCHC3-201ENST00000500893 SLC35F6Q8N357 371 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms