RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 TTLL1O95922 423 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 RXRAP19793 462 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 KIF23Q02241 960 aaPredicted RBP12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 MKRN3Q13064 507 aaKnown RBP12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 WTAPQ15007 396 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 ZYXQ15942 572 aaKnown RBP12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 IQCA1Q86XH1 822 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 TNS4Q8IZW8 715 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 FBXL16Q8N461 479 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 WDR18Q9BV38 432 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 PICK1Q9NRD5 415 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 TPCN1Q9ULQ1 816 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 TMX2Q9Y320 296 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 CSADQ9Y600 493 aa12.69□□□□□ -0.38
GPATCH4-210ENST00000498756 TOP1P11387 765 aaKnown RBP12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 LIFRP42702 1097 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 MOGSQ13724 837 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 IFIT1BQ5T764 474 aaKnown RBP12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 ERO1BQ86YB8 467 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 ZNF280CQ8ND82 737 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 WNK4Q96J92 1243 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 PRDM10Q9NQV6 1147 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 GINM1Q9NU53 330 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 TSKSQ9UJT2 592 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 HPS5Q9UPZ3 1129 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 MYH8P13535 1937 aa12.68□□□□□ -0.38
GPATCH4-210ENST00000498756 KLF18A0A0U1RQI7 1052 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 F5H6K3 240 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 SLC10A3P09131 477 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 HSPA8P11142 646 aaKnown RBP12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 PDIA3P30101 505 aaKnown RBP12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 EVCP57679 992 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 PPATQ06203 517 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 KLRC3Q07444 240 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 ST3GAL1Q11201 340 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 TROAPQ12815 778 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 MTMR2Q13614 643 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 ME3Q16798 604 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 SLC35G1Q2M3R5 365 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 SGMS1Q86VZ5 419 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 RASAL3Q86YV0 1011 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 CCDC144CPQ8IYA2 1237 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 SPICE1Q8N0Z3 855 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 FAM217BQ9NTX9 383 aaPredicted RBP12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 DOCK1Q14185 1865 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 ATAD5Q96QE3 1844 aa12.67□□□□□ -0.38
GPATCH4-210ENST00000498756 ERICH2A1L162 156 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 UNCXA6NJT0 531 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 NDUFB10O96000 172 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 CDC27P30260 824 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 NT5C2P49902 561 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 HMGCS2P54868 508 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 BACE1P56817 501 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 CCT2P78371 535 aaKnown RBP12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 PPIL2Q13356 520 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 CCDC178Q5BJE1 867 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 SPRYD7Q5W111 196 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 APOA5Q6Q788 366 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 ZNF654Q8IZM8 581 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 STAG2Q8N3U4 1231 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 NECAB1Q8N987 351 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 KIAA1683Q9H0B3 1180 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 CPVLQ9H3G5 476 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 KAT14Q9H8E8 782 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 KCNH4Q9UQ05 1017 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 THSD7BQ9C0I4 1608 aa12.66□□□□□ -0.38
GPATCH4-210ENST00000498756 CCDC69A6NI79 296 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 USP17L10C9JJH3 530 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 CA12O43570 354 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 FGD1P98174 961 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 STK3Q13188 491 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 SART3Q15020 963 aaKnown RBP12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 SH3D19Q5HYK7 790 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 SLFN13Q68D06 897 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 NBPF11Q86T75 865 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 NCOA5Q9HCD5 579 aaKnown RBP12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 RBM19Q9Y4C8 960 aaKnown RBP12.65□□□□□ -0.38
GPATCH4-210ENST00000498756 FRMPD2Q68DX3 1309 aaPredicted RBP12.64□□□□□ -0.39
GPATCH4-210ENST00000498756 CXCL11O14625 94 aa12.64□□□□□ -0.39
GPATCH4-210ENST00000498756 RAD21O60216 631 aa12.64□□□□□ -0.39
GPATCH4-210ENST00000498756 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
GPATCH4-210ENST00000498756 TRPA1O75762 1119 aa12.64□□□□□ -0.39
GPATCH4-210ENST00000498756 SNHG28P0DPA3 235 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms