RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SURF6O75683 361 aaKnown RBP4.6□□□□□ -1.67
CLTC-209ENST00000498711 NBPF7P0C2Y1 421 aaPredicted RBP4.6□□□□□ -1.67
CLTC-209ENST00000498711 HCLS1P14317 486 aaPredicted RBP4.6□□□□□ -1.67
CLTC-209ENST00000498711 ZNF746Q6NUN9 644 aaPredicted RBP4.6□□□□□ -1.67
CLTC-209ENST00000498711 TTC6Q86TZ1 520 aa4.6□□□□□ -1.67
CLTC-209ENST00000498711 FBXL16Q8N461 479 aa4.6□□□□□ -1.67
CLTC-209ENST00000498711 KAZALD1Q96I82 304 aa4.6□□□□□ -1.67
CLTC-209ENST00000498711 CLSTN2Q9H4D0 955 aa4.6□□□□□ -1.67
CLTC-209ENST00000498711 ZFYVE28Q9HCC9 887 aa4.6□□□□□ -1.67
CLTC-209ENST00000498711 NPHS2Q9NP85 383 aa4.6□□□□□ -1.67
CLTC-209ENST00000498711 TPCN1Q9ULQ1 816 aa4.6□□□□□ -1.67
CLTC-209ENST00000498711 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.6□□□□□ -1.67
CLTC-209ENST00000498711 HDAC5Q9UQL6 1122 aa4.6□□□□□ -1.67
CLTC-209ENST00000498711 SLC27A2O14975 620 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 CCDC192P0DO97 292 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 IDH3AP50213 366 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 RESTQ13127 1097 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 TOB2Q14106 344 aaPredicted RBP4.59□□□□□ -1.67
CLTC-209ENST00000498711 BMS1Q14692 1282 aaKnown RBP4.59□□□□□ -1.67
CLTC-209ENST00000498711 ANKRD1Q15327 319 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 CREB3L3Q68CJ9 461 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 NLGN1Q8N2Q7 840 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 SMARCC2Q8TAQ2 1214 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 RASGRP4Q8TDF6 673 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 SUSD3Q96L08 255 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 FEZ1Q99689 392 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 AGXT2Q9BYV1 514 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 TTC12Q9H892 705 aaPredicted RBP4.59□□□□□ -1.67
CLTC-209ENST00000498711 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.59□□□□□ -1.67
CLTC-209ENST00000498711 DIAPH3Q9NSV4 1193 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 DDX19AQ9NUU7 478 aaKnown RBP4.59□□□□□ -1.67
CLTC-209ENST00000498711 ZDHHC3Q9NYG2 299 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 CYP46A1Q9Y6A2 500 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 DDX60Q8IY21 1712 aaKnown RBP4.59□□□□□ -1.67
CLTC-209ENST00000498711 PHACTR2O75167 634 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 SASH1O94885 1247 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 RPS6KB1P23443 525 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 PSMA5P28066 241 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 ARSDP51689 593 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 ZNF75DP51815 510 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 IQCB1Q15051 598 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 AKAP4Q5JQC9 854 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 ATL3Q6DD88 541 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 KSR2Q6VAB6 950 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 CKAP2LQ8IYA6 745 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 AGBL1Q96MI9 1066 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 IL1RAPL2Q9NP60 686 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 HMG20BQ9P0W2 317 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 DMGDHQ9UI17 866 aaKnown RBP4.59□□□□□ -1.67
CLTC-209ENST00000498711 KIF3AQ9Y496 699 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 WASF2Q9Y6W5 498 aa4.59□□□□□ -1.67
CLTC-209ENST00000498711 ALDH1A1P00352 501 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 PDCP20941 246 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 GPC1P35052 558 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 FAM193AP78312 1265 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 RELBQ01201 579 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 TYRO3Q06418 890 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 TRIP4Q15650 581 aaPredicted RBP4.59□□□□□ -1.68
CLTC-209ENST00000498711 ATP2B3Q16720 1220 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 NXPE4Q6UWF7 544 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 C7orf43Q8WVR3 580 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 ZNF830Q96NB3 372 aaPredicted RBP4.59□□□□□ -1.68
CLTC-209ENST00000498711 BCO2Q9BYV7 579 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 SCAND2PQ9GZW5 306 aaPredicted RBP4.59□□□□□ -1.68
CLTC-209ENST00000498711 RCOR1Q9UKL0 485 aa4.59□□□□□ -1.68
CLTC-209ENST00000498711 SMTNL1A8MU46 457 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 GOLGA6L6A8MZA4 724 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 SRGAP3O43295 1099 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 LIG1P18858 919 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 CASTP20810 708 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 RFX5P48382 616 aaPredicted RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 AMPHP49418 695 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 MAP3K11Q16584 847 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 SLC27A3Q5K4L6 730 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 NBPF6Q5VWK0 638 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 LIAT1Q6ZQX7 453 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 LRP10Q7Z4F1 713 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 CCDC83Q8IWF9 413 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 NGDNQ8NEJ9 315 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 LEO1Q8WVC0 666 aaPredicted RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 ITPKCQ96DU7 683 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 PGBD1Q96JS3 809 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 NBPF4Q96M43 638 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 LLPHQ9BRT6 129 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 NOC4LQ9BVI4 516 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 ZNF395Q9H8N7 513 aaPredicted RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 CBX8Q9HC52 389 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 COPRSQ9NQ92 184 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 ANKIB1Q9P2G1 1089 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 RBM8AQ9Y5S9 174 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 MORC2Q9Y6X9 1032 aaPredicted RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 RGPD5Q99666 1765 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 C5P01031 1676 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 RGPD2P0DJD1 1756 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 POTECB2RU33 542 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 RNMTO43148 476 aaKnown RBP4.58□□□□□ -1.68
CLTC-209ENST00000498711 NEMFO60524 1076 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 TAF5LO75529 589 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 KIF20AO95235 890 aa4.58□□□□□ -1.68
CLTC-209ENST00000498711 ZIC2O95409 532 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms