RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ZNF70Q9UC06 446 aaPredicted RBP6.85□□□□□ -1.31
FXN-205ENST00000498653 VPS9D1Q9Y2B5 631 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 CFAP46Q8IYW2 2715 aa6.85□□□□□ -1.31
FXN-205ENST00000498653 MSCO60682 206 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 RPS8P62241 208 aaKnown RBP6.84□□□□□ -1.31
FXN-205ENST00000498653 TAP1Q03518 808 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 TXNRD3Q86VQ6 643 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 NLRP10Q86W26 655 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 TRMT44Q8IYL2 757 aaKnown RBP6.84□□□□□ -1.31
FXN-205ENST00000498653 TMEM105Q8N8V8 129 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 TRPV1Q8NER1 839 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 ADAM32Q8TC27 787 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 GDPD5Q8WTR4 605 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 SOCS4Q8WXH5 440 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 KIAA1468Q9P260 1216 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
FXN-205ENST00000498653 UTYO14607 1347 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 DCDC2BA2VCK2 349 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 BTBD11A6QL63 1104 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 TCP10L2B9ZVM9 353 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 CXCL11O14625 94 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 LMNAP02545 664 aaKnown RBP6.83□□□□□ -1.32
FXN-205ENST00000498653 NBPF20Q3BBV1 942 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 CDCA8Q53HL2 280 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 NUDT12Q9BQG2 462 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 COA1Q9GZY4 146 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 FLRT1Q9NZU1 646 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 LMCD1Q9NZU5 365 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 ANGPTL2Q9UKU9 493 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 PNMA3Q9UL41 463 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 PTPRSQ13332 1948 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 SIP14410 1827 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 FANCMQ8IYD8 2048 aa6.83□□□□□ -1.32
FXN-205ENST00000498653 SPTA1P02549 2419 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 ATG2AQ2TAZ0 1938 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 ATP2B4P23634 1241 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 IL13P35225 146 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 SLC4A3P48751 1232 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 GTF2IP78347 998 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 ANKRD33Q7Z3H0 272 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 LAPTM4BQ86VI4 370 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 DCLK2Q8N568 766 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 MRPL50Q8N5N7 158 aaKnown RBP6.82□□□□□ -1.32
FXN-205ENST00000498653 TATDN2Q93075 761 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
FXN-205ENST00000498653 APBA2Q99767 749 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 TDRD3Q9H7E2 651 aaKnown RBP6.82□□□□□ -1.32
FXN-205ENST00000498653 ADGRG1Q9Y653 693 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 COL11A1P12107 1806 aaPredicted RBP6.82□□□□□ -1.32
FXN-205ENST00000498653 RELNP78509 3460 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 FBN3Q75N90 2809 aa6.82□□□□□ -1.32
FXN-205ENST00000498653 FREM2Q5SZK8 3169 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 GOLGA8CPA6NN73 597 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 F8W031 263 aaPredicted RBP6.81□□□□□ -1.32
FXN-205ENST00000498653 KALRNO60229 2985 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 FECHP22830 423 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 KLRK1P26718 216 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 LRRC41Q15345 812 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 SMAD2Q15796 467 aaKnown RBP6.81□□□□□ -1.32
FXN-205ENST00000498653 TMEM67Q5HYA8 995 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 NOL9Q5SY16 702 aaKnown RBP6.81□□□□□ -1.32
FXN-205ENST00000498653 GADL1Q6ZQY3 521 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 NUDT18Q6ZVK8 323 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 FASTKD5Q7L8L6 764 aaKnown RBP6.81□□□□□ -1.32
FXN-205ENST00000498653 OTOP2Q7RTS6 562 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 ARRDC4Q8NCT1 418 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 PIK3R5Q8WYR1 880 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 POLR3GLQ9BT43 218 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 KRTAP3-3Q9BYR6 98 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 KRTAP3-2Q9BYR7 98 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 MTIF3Q9H2K0 278 aaKnown RBP6.81□□□□□ -1.32
FXN-205ENST00000498653 SLC24A3Q9HC58 644 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 IL23AQ9NPF7 189 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 SEC31BQ9NQW1 1179 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 TRMT112Q9UI30 125 aaKnown RBP6.81□□□□□ -1.32
FXN-205ENST00000498653 PHF24Q9UPV7 400 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 FAM50BQ9Y247 325 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 PCDHGC5Q9Y5F6 944 aa6.81□□□□□ -1.32
FXN-205ENST00000498653 IGHA2P01877 340 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 CYBAP13498 195 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 ATP2A2P16615 1042 aaKnown RBP6.8□□□□□ -1.32
FXN-205ENST00000498653 PMLP29590 882 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 SHC2P98077 582 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 DOCK1Q14185 1865 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 COL19A1Q14993 1142 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 MORN1Q5T089 497 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 TREML2Q5T2D2 321 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 ANO1Q5XXA6 986 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 LARP1BQ659C4 914 aaKnown RBP6.8□□□□□ -1.32
FXN-205ENST00000498653 LRP10Q7Z4F1 713 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 TMEFF1Q8IYR6 380 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 ZNF428Q96B54 188 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 TOX2Q96NM4 488 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 CACNA2D2Q9NY47 1150 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 ZNF112Q9UJU3 913 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 AGTPBP1Q9UPW5 1226 aa6.8□□□□□ -1.32
FXN-205ENST00000498653 APBB1O00213 710 aa6.79□□□□□ -1.32
FXN-205ENST00000498653 PEX10O60683 326 aa6.79□□□□□ -1.32
FXN-205ENST00000498653 FGBP02675 491 aa6.79□□□□□ -1.32
FXN-205ENST00000498653 PRKCSHP14314 528 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms