RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 HSP90AA2PQ14568 343 aaPredicted RBP8.4□□□□□ -1.06
PAXBP1-209ENST00000497873 PRAMEF13Q5VWM6 474 aa8.4□□□□□ -1.06
PAXBP1-209ENST00000497873 NPAS3Q8IXF0 933 aa8.4□□□□□ -1.06
PAXBP1-209ENST00000497873 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
PAXBP1-209ENST00000497873 IER2Q9BTL4 223 aa8.4□□□□□ -1.06
PAXBP1-209ENST00000497873 CHPF2Q9P2E5 772 aa8.4□□□□□ -1.06
PAXBP1-209ENST00000497873 TRBV23-1A0A0A0MS06 115 aa8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 CBFA2T2O43439 604 aa8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 PDE8AO60658 829 aa8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 ITGAVP06756 1048 aa8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 VSIG8P0DPA2 414 aa8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 POU3F3P20264 500 aaPredicted RBP8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 CT47A1Q5JQC4 288 aaPredicted RBP8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 ADAT2Q7Z6V5 191 aaKnown RBP8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 AARSD1Q9BTE6 412 aaKnown RBP8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 ATXN3LQ9H3M9 355 aa8.4□□□□□ -1.07
PAXBP1-209ENST00000497873 EEA1Q15075 1411 aa8.39□□□□□ -1.07
PAXBP1-209ENST00000497873 ERBB4Q15303 1308 aa8.39□□□□□ -1.07
PAXBP1-209ENST00000497873 RNGTTO60942 597 aaKnown RBP8.39□□□□□ -1.07
PAXBP1-209ENST00000497873 RFPL3O75679 317 aa8.39□□□□□ -1.07
PAXBP1-209ENST00000497873 DRD2P14416 443 aa8.39□□□□□ -1.07
PAXBP1-209ENST00000497873 NUTM2GQ5VZR2 741 aa8.39□□□□□ -1.07
PAXBP1-209ENST00000497873 CAAP1Q9H8G2 361 aa8.39□□□□□ -1.07
PAXBP1-209ENST00000497873 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
PAXBP1-209ENST00000497873 PLD2O14939 933 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 GRIA2P42262 883 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 DYMQ7RTS9 669 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 CYB5D2Q8WUJ1 264 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 ISL2Q96A47 359 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 KLHL25Q9H0H3 589 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 TYW1Q9NV66 732 aaKnown RBP8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 ADH5P11766 374 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 ZNF227Q86WZ6 799 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 SCUBE1Q8IWY4 988 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 SSU72Q9NP77 194 aaKnown RBP8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
PAXBP1-209ENST00000497873 PDS5BQ9NTI5 1447 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 KCNQ2O43526 872 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 NFKB2Q00653 900 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 FNDC3BQ53EP0 1204 aaKnown RBP8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 DDX42Q86XP3 938 aaKnown RBP eCLIP8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 KCT2Q8NC54 265 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 JDP2Q8WYK2 163 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 MKRN2Q9H000 416 aaKnown RBP8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 SYNJ1O43426 1573 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 PRODHO43272 600 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 TBX1O43435 398 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 CST3P01034 146 aaPredicted RBP8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 CNNM4Q6P4Q7 775 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 ACAD11Q709F0 780 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 DTWD1Q8N5C7 304 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 SMARCC1Q92922 1105 aaPredicted RBP8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 PIDD1Q9HB75 910 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 CYP4F12Q9HCS2 524 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 ZNF451Q9Y4E5 1061 aa8.37□□□□□ -1.07
PAXBP1-209ENST00000497873 SDSP20132 328 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 SOX4Q06945 474 aaPredicted RBP8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 ODR4Q5SWX8 454 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 ZNF513Q8N8E2 541 aaPredicted RBP8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 C12orf50Q8NA57 414 aaPredicted RBP8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 POLR3GLQ9BT43 218 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 MEGF11A6BM72 1044 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 BCRP11274 1271 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 SOX5P35711 763 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 FAM50AQ14320 339 aaKnown RBP8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 NSMFQ6X4W1 530 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 RNF180Q86T96 592 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 FBXO11Q86XK2 927 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 TARS2Q9BW92 718 aaKnown RBP8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 RNF208Q9H0X6 261 aa8.36□□□□□ -1.07
PAXBP1-209ENST00000497873 THOC2Q8NI27 1593 aaKnown RBP8.35□□□□□ -1.07
PAXBP1-209ENST00000497873 PABPC1P11940 636 aaKnown RBP8.35□□□□□ -1.07
PAXBP1-209ENST00000497873 ASPAP45381 313 aa8.35□□□□□ -1.07
PAXBP1-209ENST00000497873 DCAF11Q8TEB1 546 aa8.35□□□□□ -1.07
PAXBP1-209ENST00000497873 CEP89Q96ST8 783 aa8.35□□□□□ -1.07
PAXBP1-209ENST00000497873 CEP164Q9UPV0 1460 aa8.35□□□□□ -1.07
PAXBP1-209ENST00000497873 A0A0A0MRY4 1105 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 GSG1L2A8MUP6 293 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 CAP2P40123 477 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 BVESQ8NE79 360 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 ADCY4Q8NFM4 1077 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 PPP1R13LQ8WUF5 828 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 FOXQ1Q9C009 403 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 GBP3Q9H0R5 595 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 PPM1BO75688 479 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 BRDTQ58F21 947 aaPredicted RBP8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 LRRTM3Q86VH5 581 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 FMR1NBQ8N0W7 255 aaPredicted RBP8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 SMG8Q8ND04 991 aaKnown RBP8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 FAM105AQ9NUU6 356 aa8.34□□□□□ -1.07
PAXBP1-209ENST00000497873 CUX1P39880 1505 aa8.34□□□□□ -1.08
PAXBP1-209ENST00000497873 NOP56O00567 594 aaKnown RBP8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 FGFR1P11362 822 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 CD247P20963 164 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 NBPF12Q5TAG4 269 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms