RNA–Protein interactions for RNA: ENST00000497832.1

RNF25-206, Transcript of ring finger protein 25, human

TSL 3

Gene RNF25, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-206	ENST00000497832	KIF16B	Q96L93	1317 aa		13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	MED19	A0JLT2	244 aa	Predicted RBP	13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	PGK1	P00558	417 aa		13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	ACLY	P53396	1101 aa		13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	PRAMEF19	Q5SWL8	479 aa		13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	LMBR1L	Q6UX01	489 aa		13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	DPP9	Q86TI2	863 aa		13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	PRKAG3	Q9UGI9	489 aa		13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	NRBP1	Q9UHY1	535 aa		13.47	□□□□□ -0.25
RNF25-206	ENST00000497832	ZNF536	O15090	1300 aa		13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	MOXD2P	A6NHM9	499 aa		13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	ATP2A2	P16615	1042 aa	Known RBP	13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	PRDX5	P30044	214 aa		13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	ZP2	Q05996	745 aa		13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	RRP1B	Q14684	758 aa	Known RBP	13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	ARNTL2	Q8WYA1	636 aa		13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	UPF3B	Q9BZI7	483 aa	Known RBP	13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	PPP1R12C	Q9BZL4	782 aa		13.46	□□□□□ -0.25
RNF25-206	ENST00000497832	COL4A6	Q14031	1691 aa		13.46	□□□□□ -0.26
RNF25-206	ENST00000497832	ELP1	O95163	1332 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	FAM196B	A6NMK8	535 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L10	C9JJH3	530 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	ELL2	O00472	640 aa	Predicted RBP	13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	STRN	O43815	780 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	ADAMTS4	O75173	837 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	ZNF853	P0CG23	659 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	KCNA5	P22460	613 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	ADORA2A	P29274	412 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	CYP2C18	P33260	490 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	TAP1	Q03518	808 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	LBX2	Q6XYB7	198 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	ASCL5	Q7RTU5	278 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	LINS1	Q8NG48	757 aa		13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	PUS3	Q9BZE2	481 aa	Known RBP	13.45	□□□□□ -0.26
RNF25-206	ENST00000497832	PRR23A	A6NEV1	266 aa		13.44	□□□□□ -0.26
RNF25-206	ENST00000497832	NPM3	O75607	178 aa	Known RBP	13.44	□□□□□ -0.26
RNF25-206	ENST00000497832	ZEB1	P37275	1124 aa	Predicted RBP	13.44	□□□□□ -0.26
RNF25-206	ENST00000497832	ATOH1	Q92858	354 aa	Predicted RBP	13.44	□□□□□ -0.26
RNF25-206	ENST00000497832	CNTNAP3B	Q96NU0	1288 aa		13.44	□□□□□ -0.26
RNF25-206	ENST00000497832	CNTNAP3	Q9BZ76	1288 aa		13.44	□□□□□ -0.26
RNF25-206	ENST00000497832	LDHB	P07195	334 aa	Known RBP	13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	NEUROD2	Q15784	382 aa		13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	FAM126B	Q8IXS8	530 aa		13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	VGLL2	Q8N8G2	317 aa		13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	NEK9	Q8TD19	979 aa		13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	BTBD7	Q9P203	1132 aa		13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	TRPC6	Q9Y210	931 aa		13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	FRYL	O94915	3013 aa		13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.43	□□□□□ -0.26
RNF25-206	ENST00000497832	SALL1	Q9NSC2	1324 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	SETX	Q7Z333	2677 aa	Known RBP	13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	TLR3	O15455	904 aa	Known RBP	13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	COBL	O75128	1261 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	ARHGEF15	O94989	841 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	PDE8B	O95263	885 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	CD4	P01730	458 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	ASNS	P08243	561 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	PICALM	Q13492	652 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	KCTD2	Q14681	263 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	SUGP1	Q8IWZ8	645 aa	Known RBP	13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	KLHDC9	Q8NEP7	349 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	EDA	Q92838	391 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	EMILIN3	Q9NT22	766 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	SLC5A4	Q9NY91	659 aa		13.42	□□□□□ -0.26
RNF25-206	ENST00000497832	SIPA1L1	O43166	1804 aa		13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	ARVCF	O00192	962 aa		13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	IRS1	P35568	1242 aa		13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	ADHFE1	Q8IWW8	467 aa		13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	RPUSD2	Q8IZ73	545 aa	Known RBP	13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	C8orf58	Q8NAV2	365 aa		13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	PBXIP1	Q96AQ6	731 aa		13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	MAML3	Q96JK9	1138 aa		13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	GLT1D1	Q96MS3	346 aa		13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	HERC5	Q9UII4	1024 aa	Known RBP	13.41	□□□□□ -0.26
RNF25-206	ENST00000497832	USP24	Q9UPU5	2620 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	ZBBX	A8MT70	800 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L15	C9J2P7	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L13	C9JLJ4	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L11	C9JVI0	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L18	D6R9N7	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L22	D6RA61	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L17	D6RBQ6	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L19	D6RCP7	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L20	D6RJB6	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L24	Q0WX57	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	KCNA10	Q16322	511 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	NCBP3	Q53F19	620 aa	Known RBP	13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	USP17L2	Q6R6M4	530 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	VWCE	Q96DN2	955 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	FAM163A	Q96GL9	167 aa	Predicted RBP	13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	C12orf42	Q96LP6	360 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	MUTYH	Q9UIF7	546 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	FAM50B	Q9Y247	325 aa		13.4	□□□□□ -0.26
RNF25-206	ENST00000497832	SYNRG	Q9UMZ2	1314 aa		13.39	□□□□□ -0.27
RNF25-206	ENST00000497832	COL11A1	P12107	1806 aa	Predicted RBP	13.39	□□□□□ -0.27
RNF25-206	ENST00000497832		A0A0U1RQG5	324 aa	Predicted RBP	13.39	□□□□□ -0.27
RNF25-206	ENST00000497832	SOWAHB	A6NEL2	793 aa		13.39	□□□□□ -0.27
RNF25-206	ENST00000497832	TMEM221	A6NGB7	291 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms