RNA–Protein interactions for RNA: ENST00000497553.2

FOXP1-216, Transcript of forkhead box P1, humanhuman

TSL 4

Gene FOXP1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-216ENST00000497553 RAD21O60216 631 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 NMT2O60551 498 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 KDM4AO75164 1064 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 TRPA1O75762 1119 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 TTLL1O95922 423 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 VCAM1P19320 739 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 LRRC47Q8N1G4 583 aaKnown RBP12.68□□□□□ -0.38
FOXP1-216ENST00000497553 C12orf42Q96LP6 360 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 PARK7Q99497 189 aaKnown RBP12.68□□□□□ -0.38
FOXP1-216ENST00000497553 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 NYAP2Q9P242 653 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 TSKSQ9UJT2 592 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 STX8Q9UNK0 236 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 TMX2Q9Y320 296 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 TAF6LQ9Y6J9 622 aa12.68□□□□□ -0.38
FOXP1-216ENST00000497553 E7EWF7 191 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 FOXN1O15353 648 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 IRX3P78415 501 aaPredicted RBP12.67□□□□□ -0.38
FOXP1-216ENST00000497553 PABPC4Q13310 644 aaKnown RBP eCLIP12.67□□□□□ -0.38
FOXP1-216ENST00000497553 GPAT2Q6NUI2 795 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 NCOA7Q8NI08 942 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 UBAC1Q9BSL1 405 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 VCPKMTQ9H867 229 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 SLC45A1Q9Y2W3 748 aa12.67□□□□□ -0.38
FOXP1-216ENST00000497553 A0A0G2JMZ2 1700 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 ZKSCAN1P17029 563 aaPredicted RBP12.66□□□□□ -0.38
FOXP1-216ENST00000497553 CRHR2Q13324 411 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 NECTIN1Q15223 517 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 SIAH1Q8IUQ4 282 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 SPICE1Q8N0Z3 855 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
FOXP1-216ENST00000497553 LPAR1Q92633 364 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 ZKSCAN3Q9BRR0 538 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 ZFYVE28Q9HCC9 887 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
FOXP1-216ENST00000497553 TNKSO95271 1327 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.38
FOXP1-216ENST00000497553 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
FOXP1-216ENST00000497553 TBC1D8O95759 1140 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 CYP2C8P10632 490 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 HSPA8P11142 646 aaKnown RBP12.65□□□□□ -0.38
FOXP1-216ENST00000497553 OSBPP22059 807 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 MCCP23508 829 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.38
FOXP1-216ENST00000497553 CCDC178Q5BJE1 867 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 CFHR5Q9BXR6 569 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
FOXP1-216ENST00000497553 IL17RBQ9NRM6 502 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 TCP11L1Q9NUJ3 509 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 ISY1Q9ULR0 285 aaKnown RBP12.65□□□□□ -0.38
FOXP1-216ENST00000497553 SYNPO2Q9UMS6 1093 aa12.65□□□□□ -0.38
FOXP1-216ENST00000497553 CASP8AP2Q9UKL3 1982 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L15C9J2P7 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L13C9JLJ4 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L11C9JVI0 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L18D6R9N7 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L22D6RA61 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L17D6RBQ6 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L19D6RCP7 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L20D6RJB6 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 EPB41L2O43491 1005 aaKnown RBP12.64□□□□□ -0.39
FOXP1-216ENST00000497553 NDUFB10O96000 172 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 HSPA4P34932 840 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 USP17L24Q0WX57 530 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 KRT32Q14532 448 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 SART3Q15020 963 aaKnown RBP12.64□□□□□ -0.39
FOXP1-216ENST00000497553 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
FOXP1-216ENST00000497553 ZSCAN10Q96SZ4 725 aaPredicted RBP12.64□□□□□ -0.39
FOXP1-216ENST00000497553 ASCC2Q9H1I8 757 aaPredicted RBP12.64□□□□□ -0.39
FOXP1-216ENST00000497553 MTMR7Q9Y216 660 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 RLFQ13129 1914 aa12.64□□□□□ -0.39
FOXP1-216ENST00000497553 ADGRA2Q96PE1 1338 aa12.63□□□□□ -0.39
FOXP1-216ENST00000497553 COL11A1P12107 1806 aaPredicted RBP12.63□□□□□ -0.39
FOXP1-216ENST00000497553 ERICH2A1L162 156 aa12.63□□□□□ -0.39
FOXP1-216ENST00000497553 TOP1P11387 765 aaKnown RBP12.63□□□□□ -0.39
FOXP1-216ENST00000497553 HOXA7P31268 230 aaPredicted RBP12.63□□□□□ -0.39
FOXP1-216ENST00000497553 C8orf34Q49A92 452 aa12.63□□□□□ -0.39
FOXP1-216ENST00000497553 FAM83BQ5T0W9 1011 aa12.63□□□□□ -0.39
FOXP1-216ENST00000497553 ENAHQ8N8S7 591 aaPredicted RBP12.63□□□□□ -0.39
FOXP1-216ENST00000497553 GMCL1P1Q8NEA9 526 aa12.63□□□□□ -0.39
FOXP1-216ENST00000497553 MKL1Q969V6 931 aa12.63□□□□□ -0.39
FOXP1-216ENST00000497553 NUP88Q99567 741 aaPredicted RBP12.63□□□□□ -0.39
FOXP1-216ENST00000497553 R3HDMLQ9H3Y0 253 aa12.63□□□□□ -0.39
FOXP1-216ENST00000497553 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
FOXP1-216ENST00000497553 ZSWIM8A7E2V4 1837 aa12.62□□□□□ -0.39
FOXP1-216ENST00000497553 MGAMO43451 1857 aa12.62□□□□□ -0.39
FOXP1-216ENST00000497553 F5H6K3 240 aa12.62□□□□□ -0.39
FOXP1-216ENST00000497553 IFIT3O14879 490 aaKnown RBP12.62□□□□□ -0.39
FOXP1-216ENST00000497553 TLR2O60603 784 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms