RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 C9orf131Q5VYM1 1079 aa14.1□□□□□ -0.15
HPS1-213ENST00000497527 SAMD7Q7Z3H4 446 aa14.1□□□□□ -0.15
HPS1-213ENST00000497527 MKL1Q969V6 931 aa14.1□□□□□ -0.15
HPS1-213ENST00000497527 ZNF396Q96N95 335 aaPredicted RBP14.1□□□□□ -0.15
HPS1-213ENST00000497527 SCAND2PQ9GZW5 306 aaPredicted RBP14.1□□□□□ -0.15
HPS1-213ENST00000497527 HACL1Q9UJ83 578 aa14.1□□□□□ -0.15
HPS1-213ENST00000497527 CFAP45Q9UL16 551 aa14.1□□□□□ -0.15
HPS1-213ENST00000497527 PITPNM2Q9BZ72 1349 aa14.1□□□□□ -0.15
HPS1-213ENST00000497527 SHTN1A0MZ66 631 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 PLEKHA8P1O95397 391 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 ICA1Q05084 483 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 RESTQ13127 1097 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 GNL2Q13823 731 aaKnown RBP14.09□□□□□ -0.15
HPS1-213ENST00000497527 GPATCH4Q5T3I0 446 aaKnown RBP14.09□□□□□ -0.15
HPS1-213ENST00000497527 DCAF15Q66K64 600 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 KRT40Q6A162 431 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 FERMT3Q86UX7 667 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 TMEM87AQ8NBN3 555 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 SPZ1Q9BXG8 430 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 TMEM39BQ9GZU3 492 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 SH2D4AQ9H788 454 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 BRMS1Q9HCU9 246 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 ADARB2Q9NS39 739 aaKnown RBP14.09□□□□□ -0.15
HPS1-213ENST00000497527 CLIP2Q9UDT6 1046 aa14.09□□□□□ -0.15
HPS1-213ENST00000497527 BAZ2BQ9UIF8 2168 aaKnown RBP14.09□□□□□ -0.15
HPS1-213ENST00000497527 POLR2AP24928 1970 aaKnown RBP14.09□□□□□ -0.15
HPS1-213ENST00000497527 FAM196BA6NMK8 535 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 SNHG28P0DPA3 235 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 FOSBP53539 338 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 FUT2Q10981 343 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 CCDC82Q8N4S0 544 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 DCAF4Q8WV16 495 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 ARHGEF10LQ9HCE6 1279 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 PGAP2Q9UHJ9 254 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 MAD2L2Q9UI95 211 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 DOCK1Q14185 1865 aa14.08□□□□□ -0.16
HPS1-213ENST00000497527 KLRF2D3W0D1 207 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 hCG_1984214I3L0E3 225 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 DTNBO60941 627 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 PPFIA3O75145 1194 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 MBD3O95983 291 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 ASNSP08243 561 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 PDHBP11177 359 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 SCG2P13521 617 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 EEF2P13639 858 aaKnown RBP14.07□□□□□ -0.16
HPS1-213ENST00000497527 ATP2B2Q01814 1243 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 GUCY1B3Q02153 619 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 SEPT2Q15019 361 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 PFKFB3Q16875 520 aaPredicted RBP14.07□□□□□ -0.16
HPS1-213ENST00000497527 SRBD1Q8N5C6 995 aaKnown RBP14.07□□□□□ -0.16
HPS1-213ENST00000497527 ZNF713Q8N859 430 aaPredicted RBP14.07□□□□□ -0.16
HPS1-213ENST00000497527 CCDC148Q8NFR7 591 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 CCDC12Q8WUD4 166 aaPredicted RBP14.07□□□□□ -0.16
HPS1-213ENST00000497527 SH3GLB2Q9NR46 395 aa14.07□□□□□ -0.16
HPS1-213ENST00000497527 V9GY48 417 aaPredicted RBP14.07□□□□□ -0.16
HPS1-213ENST00000497527 TRAK2O60296 914 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 DDNO94850 711 aaPredicted RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 GDF11O95390 407 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 EGFRP00533 1210 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 GH2P01242 217 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 MMP1P03956 469 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 CALML3P27482 149 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 KIF23Q02241 960 aaPredicted RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 DNM1Q05193 864 aaKnown RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 ZNF543Q08ER8 600 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 ANGEL2Q5VTE6 544 aaKnown RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 CMTR1Q8N1G2 835 aaKnown RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 LRRC47Q8N1G4 583 aaKnown RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 GMCL1P1Q8NEA9 526 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 RRP36Q96EU6 259 aaKnown RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 ZNF341Q9BYN7 854 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 DEFB129Q9H1M3 183 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 FOXP1Q9H334 677 aaPredicted RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 LMBRD1Q9NUN5 540 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 SEC63Q9UGP8 760 aaKnown RBP14.06□□□□□ -0.16
HPS1-213ENST00000497527 ZBTB21Q9ULJ3 1066 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 ELP1O95163 1332 aa14.06□□□□□ -0.16
HPS1-213ENST00000497527 PRPF40AO75400 957 aaKnown RBP14.05□□□□□ -0.16
HPS1-213ENST00000497527 CAP2P40123 477 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 EPS15P42566 896 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 PKN1Q16512 942 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 CCDC96Q2M329 555 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 FOXD4L6Q3SYB3 417 aaPredicted RBP14.05□□□□□ -0.16
HPS1-213ENST00000497527 SUPT20HL1Q3ZLR7 823 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 GALNT17Q6IS24 598 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 FOXD4L3Q6VB84 417 aaPredicted RBP14.05□□□□□ -0.16
HPS1-213ENST00000497527 STAG2Q8N3U4 1231 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 TRPM4Q8TD43 1214 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 TEPSINQ96N21 525 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 AIFM3Q96NN9 605 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 GOPCQ9HD26 462 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 MTMR7Q9Y216 660 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 CNPY2Q9Y2B0 182 aa14.05□□□□□ -0.16
HPS1-213ENST00000497527 DDX49Q9Y6V7 483 aaKnown RBP14.05□□□□□ -0.16
HPS1-213ENST00000497527 USP17L5A8MUK1 530 aa14.04□□□□□ -0.16
HPS1-213ENST00000497527 FIBPO43427 364 aa14.04□□□□□ -0.16
HPS1-213ENST00000497527 CTNND1O60716 968 aaKnown RBP14.04□□□□□ -0.16
HPS1-213ENST00000497527 U2AF2P26368 475 aaKnown RBP eCLIP14.04□□□□□ -0.16
HPS1-213ENST00000497527 GUCY1A2P33402 732 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms