RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 ADGRA2Q96PE1 1338 aa19.15■□□□□ 0.66
FAM3A-220ENST00000497506 LBX1P52954 281 aa19.14■□□□□ 0.65
FAM3A-220ENST00000497506 ZSWIM5Q9P217 1185 aa19.14■□□□□ 0.65
FAM3A-220ENST00000497506 TLR2O60603 784 aa19.13■□□□□ 0.65
FAM3A-220ENST00000497506 REC8O95072 547 aa19.13■□□□□ 0.65
FAM3A-220ENST00000497506 PABPC4Q13310 644 aaKnown RBP eCLIP19.13■□□□□ 0.653e-6■■■□□ 15.2
FAM3A-220ENST00000497506 NOM1Q5C9Z4 860 aaKnown RBP19.13■□□□□ 0.65
FAM3A-220ENST00000497506 PPP4R3BQ5MIZ7 849 aa19.13■□□□□ 0.65
FAM3A-220ENST00000497506 LPAR1Q92633 364 aa19.13■□□□□ 0.65
FAM3A-220ENST00000497506 PARK7Q99497 189 aaKnown RBP19.13■□□□□ 0.65
FAM3A-220ENST00000497506 ASCC2Q9H1I8 757 aaPredicted RBP19.13■□□□□ 0.65
FAM3A-220ENST00000497506 SYNPO2Q9UMS6 1093 aa19.13■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L15C9J2P7 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L13C9JLJ4 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L11C9JVI0 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L18D6R9N7 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L22D6RA61 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L17D6RBQ6 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L19D6RCP7 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L20D6RJB6 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 F5H6K3 240 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 GPR25O00155 361 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 KLRC3Q07444 240 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 USP17L24Q0WX57 530 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 RCSD1Q6JBY9 416 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 CATSPERGQ6ZRH7 1159 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 CYB5R4Q7L1T6 521 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 SPICE1Q8N0Z3 855 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 ZKSCAN3Q9BRR0 538 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 RPAP3Q9H6T3 665 aaPredicted RBP19.12■□□□□ 0.65
FAM3A-220ENST00000497506 GOPCQ9HD26 462 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 PNMA3Q9UL41 463 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 STX8Q9UNK0 236 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 CASP8AP2Q9UKL3 1982 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 RLFQ13129 1914 aa19.12■□□□□ 0.65
FAM3A-220ENST00000497506 OSBPP22059 807 aa19.11■□□□□ 0.65
FAM3A-220ENST00000497506 TRDNQ13061 729 aa19.11■□□□□ 0.65
FAM3A-220ENST00000497506 C17orf99Q6UX52 265 aa19.11■□□□□ 0.65
FAM3A-220ENST00000497506 RASEFQ8IZ41 740 aa19.11■□□□□ 0.65
FAM3A-220ENST00000497506 LRRC47Q8N1G4 583 aaKnown RBP19.11■□□□□ 0.65
FAM3A-220ENST00000497506 NCOA7Q8NI08 942 aa19.11■□□□□ 0.65
FAM3A-220ENST00000497506 TTC14Q96N46 770 aa19.11■□□□□ 0.65
FAM3A-220ENST00000497506 P2RX7Q99572 595 aaKnown RBP19.11■□□□□ 0.65
FAM3A-220ENST00000497506 PARP14Q460N5 1801 aa19.11■□□□□ 0.65
FAM3A-220ENST00000497506 WDR46O15213 610 aaKnown RBP19.1■□□□□ 0.65
FAM3A-220ENST00000497506 EPB41L2O43491 1005 aaKnown RBP19.1■□□□□ 0.65
FAM3A-220ENST00000497506 NDUFB10O96000 172 aa19.1■□□□□ 0.65
FAM3A-220ENST00000497506 IRX3P78415 501 aaPredicted RBP19.1■□□□□ 0.65
FAM3A-220ENST00000497506 TSGA10IPQ3SY00 556 aa19.1■□□□□ 0.65
FAM3A-220ENST00000497506 RNF20Q5VTR2 975 aa19.1■□□□□ 0.65
FAM3A-220ENST00000497506 IQCA1Q86XH1 822 aa19.1■□□□□ 0.65
FAM3A-220ENST00000497506 MB21D2Q8IYB1 491 aaPredicted RBP19.1■□□□□ 0.65
FAM3A-220ENST00000497506 GMCL1P1Q8NEA9 526 aa19.1■□□□□ 0.65
FAM3A-220ENST00000497506 ZNF296Q8WUU4 475 aaPredicted RBP19.1■□□□□ 0.65
FAM3A-220ENST00000497506 KCNB2Q92953 911 aa19.1■□□□□ 0.65
FAM3A-220ENST00000497506 ZSCAN10Q96SZ4 725 aaPredicted RBP19.1■□□□□ 0.65
FAM3A-220ENST00000497506 TMEM47Q9BQJ4 181 aa19.1■□□□□ 0.65
FAM3A-220ENST00000497506 CPA4Q9UI42 421 aa19.1■□□□□ 0.65
FAM3A-220ENST00000497506 BCRP11274 1271 aa19.09■□□□□ 0.65
FAM3A-220ENST00000497506 TOP1P11387 765 aaKnown RBP19.09■□□□□ 0.65
FAM3A-220ENST00000497506 HSPA4P34932 840 aa19.09■□□□□ 0.65
FAM3A-220ENST00000497506 COL9A3Q14050 684 aaPredicted RBP19.09■□□□□ 0.65
FAM3A-220ENST00000497506 CCDC178Q5BJE1 867 aa19.09■□□□□ 0.65
FAM3A-220ENST00000497506 POTEEQ6S8J3 1075 aa19.09■□□□□ 0.65
FAM3A-220ENST00000497506 RALYLQ86SE5 291 aaKnown RBP19.09■□□□□ 0.65
FAM3A-220ENST00000497506 DGKHQ86XP1 1220 aa19.09■□□□□ 0.65
FAM3A-220ENST00000497506 ANKS1AQ92625 1134 aa19.09■□□□□ 0.65
FAM3A-220ENST00000497506 USP26Q9BXU7 913 aa19.09■□□□□ 0.65
FAM3A-220ENST00000497506 PRDM10Q9NQV6 1147 aa19.09■□□□□ 0.65
FAM3A-220ENST00000497506 TNKSO95271 1327 aa19.08■□□□□ 0.65
FAM3A-220ENST00000497506 RAD21O60216 631 aa19.08■□□□□ 0.64
FAM3A-220ENST00000497506 FKTNO75072 461 aa19.08■□□□□ 0.64
FAM3A-220ENST00000497506 ANTXR2P58335 489 aa19.08■□□□□ 0.64
FAM3A-220ENST00000497506 HERVK_113P62684 666 aa19.08■□□□□ 0.64
FAM3A-220ENST00000497506 FAM83BQ5T0W9 1011 aa19.08■□□□□ 0.64
FAM3A-220ENST00000497506 ENAHQ8N8S7 591 aaPredicted RBP19.08■□□□□ 0.64
FAM3A-220ENST00000497506 SMCR8Q8TEV9 937 aaPredicted RBP19.08■□□□□ 0.64
FAM3A-220ENST00000497506 NUP88Q99567 741 aaPredicted RBP19.08■□□□□ 0.64
FAM3A-220ENST00000497506 TANGO6Q9C0B7 1094 aa19.08■□□□□ 0.64
FAM3A-220ENST00000497506 GCLCP48506 637 aaPredicted RBP19.07■□□□□ 0.64
FAM3A-220ENST00000497506 SP3Q02447 781 aa19.07■□□□□ 0.64
FAM3A-220ENST00000497506 SEC23AQ15436 765 aa19.07■□□□□ 0.64
FAM3A-220ENST00000497506 SLFN13Q68D06 897 aa19.07■□□□□ 0.64
FAM3A-220ENST00000497506 UBAC1Q9BSL1 405 aa19.07■□□□□ 0.64
FAM3A-220ENST00000497506 ZKSCAN1P17029 563 aaPredicted RBP19.06■□□□□ 0.64
FAM3A-220ENST00000497506 COG2Q14746 738 aa19.06■□□□□ 0.64
FAM3A-220ENST00000497506 ADCK5Q3MIX3 580 aa19.06■□□□□ 0.64
FAM3A-220ENST00000497506 LBX2Q6XYB7 198 aa19.06■□□□□ 0.64
FAM3A-220ENST00000497506 CHST3Q7LGC8 479 aa19.06■□□□□ 0.64
FAM3A-220ENST00000497506 GMCL1Q96IK5 515 aa19.06■□□□□ 0.64
FAM3A-220ENST00000497506 RBPJLQ9UBG7 517 aa19.06■□□□□ 0.64
FAM3A-220ENST00000497506 SNX14Q9Y5W7 946 aa19.06■□□□□ 0.64
FAM3A-220ENST00000497506 SPDYE16A6NNV3 312 aaPredicted RBP19.05■□□□□ 0.64
FAM3A-220ENST00000497506 SEC24BO95487 1268 aa19.05■□□□□ 0.64
FAM3A-220ENST00000497506 MCCP23508 829 aa19.05■□□□□ 0.64
FAM3A-220ENST00000497506 DSG3P32926 999 aa19.05■□□□□ 0.64
FAM3A-220ENST00000497506 CAP1Q01518 475 aa19.05■□□□□ 0.64
FAM3A-220ENST00000497506 C8orf34Q49A92 452 aa19.05■□□□□ 0.64
FAM3A-220ENST00000497506 RASGRP2Q7LDG7 609 aa19.05■□□□□ 0.64
FAM3A-220ENST00000497506 ANKRD13CQ8N6S4 541 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms