RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 ZNF341Q9BYN7 854 aa11.51□□□□□ -0.57
TCTN3-206ENST00000497399 SH2B1Q9NRF2 756 aaPredicted RBP11.51□□□□□ -0.57
TCTN3-206ENST00000497399 MTMR4Q9NYA4 1195 aa11.51□□□□□ -0.57
TCTN3-206ENST00000497399 ZNF112Q9UJU3 913 aa11.51□□□□□ -0.57
TCTN3-206ENST00000497399 ZBTB21Q9ULJ3 1066 aa11.51□□□□□ -0.57
TCTN3-206ENST00000497399 FZD1Q9UP38 647 aa11.51□□□□□ -0.57
TCTN3-206ENST00000497399 RBBP6Q7Z6E9 1792 aaKnown RBP11.5□□□□□ -0.57
TCTN3-206ENST00000497399 CCDC69A6NI79 296 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 UBE2Q2LH0YL09 131 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 USP2O75604 605 aaPredicted RBP11.5□□□□□ -0.57
TCTN3-206ENST00000497399 GH2P01242 217 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 SCRN1Q12765 414 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 TROAPQ12815 778 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 STK3Q13188 491 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 SUPT20HL1Q3ZLR7 823 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 TMEM179Q6ZVK1 233 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 ZNF654Q8IZM8 581 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 GTF3C6Q969F1 213 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 HOOK2Q96ED9 719 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 MYL10Q9BUA6 226 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
TCTN3-206ENST00000497399 STX8Q9UNK0 236 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 NID2Q14112 1375 aa11.5□□□□□ -0.57
TCTN3-206ENST00000497399 GOLGA8BA8MQT2 603 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 TOP1P11387 765 aaKnown RBP11.49□□□□□ -0.57
TCTN3-206ENST00000497399 RXRAP19793 462 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 INPP5BP32019 993 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 TM4SF4P48230 202 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 FKBP1BP68106 108 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 CCT2P78371 535 aaKnown RBP11.49□□□□□ -0.57
TCTN3-206ENST00000497399 CCDC83Q8IWF9 413 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 MKL1Q969V6 931 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 CABP5Q9NP86 173 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 FAM217BQ9NTX9 383 aaPredicted RBP11.49□□□□□ -0.57
TCTN3-206ENST00000497399 NYAP2Q9P242 653 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 SLC12A7Q9Y666 1083 aa11.49□□□□□ -0.57
TCTN3-206ENST00000497399 MYH6P13533 1939 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 ZBTB43O43298 467 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 CTNND1O60716 968 aaKnown RBP11.48□□□□□ -0.57
TCTN3-206ENST00000497399 DTNBO60941 627 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 TTLL1O95922 423 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 EEF2P13639 858 aaKnown RBP11.48□□□□□ -0.57
TCTN3-206ENST00000497399 CDC27P30260 824 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 RCAN1P53805 252 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 PRKG1Q13976 671 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 RAB3GAP1Q15042 981 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 CCDC84Q86UT8 332 aaPredicted RBP11.48□□□□□ -0.57
TCTN3-206ENST00000497399 MICU3Q86XE3 530 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 SPRYD3Q8NCJ5 442 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 PNMA1Q8ND90 353 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
TCTN3-206ENST00000497399 SLKQ9H2G2 1235 aaPredicted RBP11.48□□□□□ -0.57
TCTN3-206ENST00000497399 KAT14Q9H8E8 782 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 NCOA5Q9HCD5 579 aaKnown RBP11.48□□□□□ -0.57
TCTN3-206ENST00000497399 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 CLIP2Q9UDT6 1046 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 NAP1L2Q9ULW6 460 aaPredicted RBP11.48□□□□□ -0.57
TCTN3-206ENST00000497399 PDE4DIPQ5VU43 2346 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 HTTP42858 3142 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 CENPFP49454 3210 aa11.48□□□□□ -0.57
TCTN3-206ENST00000497399 A0A1W2PRG0 241 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 GOLGA8AA7E2F4 631 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 DDAH1O94760 285 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 CTDNEP1O95476 244 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 ASNSP08243 561 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 ADD1P35611 737 aaKnown RBP11.47□□□□□ -0.57
TCTN3-206ENST00000497399 METAP2P50579 478 aaKnown RBP eCLIP11.47□□□□□ -0.57
TCTN3-206ENST00000497399 ICA1Q05084 483 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 NOL9Q5SY16 702 aaKnown RBP11.47□□□□□ -0.57
TCTN3-206ENST00000497399 LDLRAD1Q5T700 205 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 SYNE3Q6ZMZ3 975 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 RASGRP2Q7LDG7 609 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 CATIPQ7Z7H3 387 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 CCDC144CPQ8IYA2 1237 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 SCYL3Q8IZE3 742 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 LRRC47Q8N1G4 583 aaKnown RBP11.47□□□□□ -0.57
TCTN3-206ENST00000497399 ACER1Q8TDN7 264 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 NUP133Q8WUM0 1156 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 ZKSCAN4Q969J2 545 aaPredicted RBP11.47□□□□□ -0.57
TCTN3-206ENST00000497399 INTS4Q96HW7 963 aaKnown RBP11.47□□□□□ -0.57
TCTN3-206ENST00000497399 WRNIP1Q96S55 665 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 BRCA2P51587 3418 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 BAZ2BQ9UIF8 2168 aaKnown RBP11.47□□□□□ -0.57
TCTN3-206ENST00000497399 PTPRFP10586 1907 aa11.47□□□□□ -0.57
TCTN3-206ENST00000497399 TBC1D8O95759 1140 aa11.46□□□□□ -0.57
TCTN3-206ENST00000497399 SOX10P56693 466 aa11.46□□□□□ -0.57
TCTN3-206ENST00000497399 MAP3K9P80192 1104 aa11.46□□□□□ -0.57
TCTN3-206ENST00000497399 ATP2B2Q01814 1243 aa11.46□□□□□ -0.57
TCTN3-206ENST00000497399 GRM4Q14833 912 aa11.46□□□□□ -0.57
TCTN3-206ENST00000497399 NTRK3Q16288 839 aa11.46□□□□□ -0.57
TCTN3-206ENST00000497399 MAP3K11Q16584 847 aa11.46□□□□□ -0.57
TCTN3-206ENST00000497399 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.46□□□□□ -0.57
TCTN3-206ENST00000497399 FANCBQ8NB91 859 aa11.46□□□□□ -0.57
TCTN3-206ENST00000497399 NSUN7Q8NE18 718 aaKnown RBP11.46□□□□□ -0.57
TCTN3-206ENST00000497399 SMARCC2Q8TAQ2 1214 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms